Cow genome map
| Conread name: | Ss1.1-rcbl0_005307.5 |
| Conread position: | 587-911 |
| Cow position: | chr6:50140258-50139920 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 589-869 |
| Cow position: | chr6:9251415-9251694 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 592-906 |
| Cow position: | chr6:20127936-20128262 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 597-855 |
| Cow position: | chr6:42830431-42830173 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 597-882 |
| Cow position: | chr6:23017152-23017446 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 606-870 |
| Cow position: | chr6:9024607-9024879 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 614-797 |
| Cow position: | chr6:47863721-47863905 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 622-787 |
| Cow position: | chr6:18684709-18684545 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 156 |
| Conread position: | 624-885 |
| Cow position: | chr6:8455925-8455658 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 625-910 |
| Cow position: | chr6:64407850-64407553 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 636-869 |
| Cow position: | chr6:59149404-59149645 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 636-884 |
| Cow position: | chr6:59254604-59254343 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 133, 106 |
| Conread position: | 636-912 |
| Cow position: | chr6:23529922-23529638 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 140, 66 |
| Conread position: | 636-912 |
| Cow position: | chr6:35709394-35709102 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 41 |
| Conread position: | 657-912 |
| Cow position: | chr6:35216623-35216892 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 659-912 |
| Cow position: | chr6:3558870-3559130 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 659-912 |
| Cow position: | chr6:12543927-12543660 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 179 |
| Conread position: | 662-910 |
| Cow position: | chr6:18613965-18614224 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 12 |
Show alignments to all cow chromosomes.