Cow genome map


           Conread name:
           Ss1.1-rche29_e3.5
        

               Conread position:
               1-176
               

               Cow position:
               chr17:21428140-21428315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               1-251
               

               Cow position:
               chr17:21977645-21977896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               1-341
               

               Cow position:
               chr17:4609332-4609677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               1-420
               

               Cow position:
               chr17:10400463-10400869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 128
               

               Conread position:
               2-185
               

               Cow position:
               chr17:4604338-4604528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               8-351
               

               Cow position:
               chr17:2767215-2766880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               154-340
               

               Cow position:
               chr17:21428722-21428906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               204-420
               

               Cow position:
               chr17:32385142-32384924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 17
               
Show alignments to all cow chromosomes.