Cow genome map


           Conread name:
           Ss1.1-rche29_e3.5
        

               Conread position:
               1-133
               

               Cow position:
               chr19:20036170-20036301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1-298
               

               Cow position:
               chr19:20083933-20084212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 141
               

               Conread position:
               2-339
               

               Cow position:
               chr19:3412303-3411951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               4-420
               

               Cow position:
               chr19:49866245-49865801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               5-172
               

               Cow position:
               chr19:52359721-52359555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 88
               

               Conread position:
               38-340
               

               Cow position:
               chr19:50785176-50785477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               147-341
               

               Cow position:
               chr19:45597392-45597198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               156-340
               

               Cow position:
               chr19:53748380-53748196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 29
               
Show alignments to all cow chromosomes.