Cow genome map
| Conread name: | Ss1.1-rche29_e3.5 | 
| Conread position: | 1-255 | 
| Cow position: | chr6:27488375-27488129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 56, 77 | 
| Conread position: | 1-313 | 
| Cow position: | chr6:15638627-15638927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 77 | 
| Conread position: | 1-336 | 
| Cow position: | chr6:50787132-50786787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 197 | 
| Conread position: | 1-338 | 
| Cow position: | chr6:42716722-42716398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 119 | 
| Conread position: | 2-420 | 
| Cow position: | chr6:50312433-50312021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 76 | 
| Conread position: | 3-161 | 
| Cow position: | chr6:58697214-58697375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 38, 75 | 
| Conread position: | 5-420 | 
| Cow position: | chr6:43189171-43189578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 76, 66 | 
| Conread position: | 38-340 | 
| Cow position: | chr6:54339670-54339378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 117 | 
| Conread position: | 155-420 | 
| Cow position: | chr6:58697612-58697880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 89, 32 | 
Show alignments to all cow chromosomes.
