Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 93-338 |
| Cow position: | chr12:5658863-5658607 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 98-319 |
| Cow position: | chr12:31528960-31528735 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 103-355 |
| Cow position: | chr12:7996309-7996567 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 106-344 |
| Cow position: | chr12:48425610-48425855 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 109-357 |
| Cow position: | chr12:4582846-4583100 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 7 |
| Conread position: | 112-309 |
| Cow position: | chr12:21828991-21829183 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 112-324 |
| Cow position: | chr12:17109986-17109770 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 142 |
| Conread position: | 112-337 |
| Cow position: | chr12:1223439-1223210 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 170 |
| Conread position: | 112-358 |
| Cow position: | chr12:18769169-18768913 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 206 |
| Conread position: | 115-341 |
| Cow position: | chr12:40716134-40715906 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 119-379 |
| Cow position: | chr12:25312460-25312191 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 15, 136 |
| Conread position: | 124-335 |
| Cow position: | chr12:30064858-30065069 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 125-360 |
| Cow position: | chr12:18966834-18966594 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 131-338 |
| Cow position: | chr12:41642353-41642571 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 132-307 |
| Cow position: | chr12:14325341-14325164 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 34 |
| Conread position: | 135-310 |
| Cow position: | chr12:5797630-5797453 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 141-316 |
| Cow position: | chr12:44057455-44057631 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 144-347 |
| Cow position: | chr12:18093831-18094038 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 7 |
| Conread position: | 146-335 |
| Cow position: | chr12:7645864-7645674 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 151-324 |
| Cow position: | chr12:25933627-25933808 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 154-316 |
| Cow position: | chr12:5497875-5497709 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 155-357 |
| Cow position: | chr12:29691245-29691041 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 156-324 |
| Cow position: | chr12:45541659-45541831 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 6, 158 |
| Conread position: | 191-324 |
| Cow position: | chr12:28017038-28017171 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-324 |
| Cow position: | chr12:36109268-36109136 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.