Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 52-357 |
| Cow position: | chr14:23008338-23008035 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 77-338 |
| Cow position: | chr14:8488319-8488061 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 99-321 |
| Cow position: | chr14:33553297-33553079 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 100-288 |
| Cow position: | chr14:22657353-22657164 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 100-354 |
| Cow position: | chr14:6984852-6985104 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 17 |
| Conread position: | 101-381 |
| Cow position: | chr14:2189745-2189458 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 103-335 |
| Cow position: | chr14:37678894-37679135 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 105-335 |
| Cow position: | chr14:35700532-35700296 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 106-324 |
| Cow position: | chr14:21018217-21017994 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 110-288 |
| Cow position: | chr14:46962636-46962465 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 112-324 |
| Cow position: | chr14:27104181-27103963 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 112-361 |
| Cow position: | chr14:21691173-21691430 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 116-356 |
| Cow position: | chr14:7582356-7582596 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 165 |
| Conread position: | 131-335 |
| Cow position: | chr14:28605314-28605100 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 131-339 |
| Cow position: | chr14:21084423-21084204 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 211 |
| Conread position: | 131-339 |
| Cow position: | chr14:26108715-26108497 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 131-347 |
| Cow position: | chr14:20865237-20865453 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 132-332 |
| Cow position: | chr14:47974059-47973855 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 132-347 |
| Cow position: | chr14:7813493-7813709 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 132-386 |
| Cow position: | chr14:47604220-47604477 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 183 |
| Conread position: | 133-319 |
| Cow position: | chr14:28565545-28565359 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 133-324 |
| Cow position: | chr14:6441986-6441786 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 136-331 |
| Cow position: | chr14:21369439-21369240 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 138-324 |
| Cow position: | chr14:43031869-43031675 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 141-324 |
| Cow position: | chr14:47138721-47138909 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 141-335 |
| Cow position: | chr14:43565820-43566011 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 142-311 |
| Cow position: | chr14:26960349-26960525 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 143-335 |
| Cow position: | chr14:19022831-19023029 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 145-280 |
| Cow position: | chr14:31399659-31399518 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 168-347 |
| Cow position: | chr14:26153226-26153413 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 171-318 |
| Cow position: | chr14:37624733-37624885 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 191-372 |
| Cow position: | chr14:8517977-8518153 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 176, 83 |
| Conread position: | 192-335 |
| Cow position: | chr14:5677370-5677231 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.