Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 70-311 |
| Cow position: | chr18:10101356-10101605 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 86-347 |
| Cow position: | chr18:38126568-38126296 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 108-310 |
| Cow position: | chr18:16448462-16448660 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 110-287 |
| Cow position: | chr18:34325044-34324861 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 110-335 |
| Cow position: | chr18:35797533-35797752 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 110-347 |
| Cow position: | chr18:37331618-37331376 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 112-310 |
| Cow position: | chr18:15831683-15831481 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 112-316 |
| Cow position: | chr18:16726558-16726774 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 112-338 |
| Cow position: | chr18:11362161-11362394 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 129-278 |
| Cow position: | chr18:19850792-19850641 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 5 |
| Conread position: | 131-299 |
| Cow position: | chr18:23424849-23425024 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 132-346 |
| Cow position: | chr18:5755910-5756131 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 133-363 |
| Cow position: | chr18:55697088-55696858 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 141-299 |
| Cow position: | chr18:33275235-33275395 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 141-338 |
| Cow position: | chr18:35767114-35767313 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 141-347 |
| Cow position: | chr18:33843147-33842931 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 142-386 |
| Cow position: | chr18:43711988-43712234 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 150-318 |
| Cow position: | chr18:26372868-26373045 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 151-354 |
| Cow position: | chr18:48458623-48458830 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 165 |
| Conread position: | 154-331 |
| Cow position: | chr18:30566603-30566421 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 190-324 |
| Cow position: | chr18:35607922-35608056 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-312 |
| Cow position: | chr18:21095106-21094986 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 192-323 |
| Cow position: | chr18:7409303-7409174 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 193-360 |
| Cow position: | chr18:28794837-28795000 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.