Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 63-323 |
| Cow position: | chr19:54225425-54225160 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 74-322 |
| Cow position: | chr19:7839153-7838898 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 179 |
| Conread position: | 99-324 |
| Cow position: | chr19:7029836-7030070 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 104-345 |
| Cow position: | chr19:27346726-27346490 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 110-338 |
| Cow position: | chr19:25271485-25271252 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 110-363 |
| Cow position: | chr19:15936767-15937021 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 110-374 |
| Cow position: | chr19:48478909-48479177 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 111-319 |
| Cow position: | chr19:31827028-31827237 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 111-323 |
| Cow position: | chr19:11876773-11876551 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 112-281 |
| Cow position: | chr19:19661977-19662154 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 112-314 |
| Cow position: | chr19:33260962-33261164 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 112-320 |
| Cow position: | chr19:6735298-6735076 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 112-322 |
| Cow position: | chr19:904909-905116 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 112-324 |
| Cow position: | chr19:21285143-21284928 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 112-324 |
| Cow position: | chr19:55236420-55236638 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 112-335 |
| Cow position: | chr19:2342413-2342640 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 112-335 |
| Cow position: | chr19:36976982-36976748 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 112-338 |
| Cow position: | chr19:36461600-36461361 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 117-335 |
| Cow position: | chr19:952629-952852 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 117-335 |
| Cow position: | chr19:2771076-2770854 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 118-391 |
| Cow position: | chr19:38871003-38871285 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 130-314 |
| Cow position: | chr19:30935821-30935632 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 131-324 |
| Cow position: | chr19:53738287-53738486 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 150 |
| Conread position: | 131-339 |
| Cow position: | chr19:43727089-43727300 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 135-325 |
| Cow position: | chr19:24689240-24689431 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 176 |
| Conread position: | 141-324 |
| Cow position: | chr19:11636976-11636793 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 141-335 |
| Cow position: | chr19:31126759-31126961 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 144-381 |
| Cow position: | chr19:28842397-28842149 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 159-348 |
| Cow position: | chr19:2280661-2280470 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 161-403 |
| Cow position: | chr19:31381021-31380781 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 191-295 |
| Cow position: | chr19:46306318-46306214 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-324 |
| Cow position: | chr19:11759210-11759076 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 191-353 |
| Cow position: | chr19:11147602-11147443 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 191-367 |
| Cow position: | chr19:38025712-38025892 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 200-338 |
| Cow position: | chr19:41459224-41459362 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.