Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 102-276 |
| Cow position: | chr20:29308523-29308353 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 27 |
| Conread position: | 103-324 |
| Cow position: | chr20:32667952-32668175 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 106-335 |
| Cow position: | chr20:25686370-25686130 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 110-312 |
| Cow position: | chr20:24234139-24234341 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 131 |
| Conread position: | 110-331 |
| Cow position: | chr20:17397274-17397051 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 111-307 |
| Cow position: | chr20:25274305-25274103 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 112-311 |
| Cow position: | chr20:17670167-17670376 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 20, 173 |
| Conread position: | 112-311 |
| Cow position: | chr20:38858434-38858242 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 112-324 |
| Cow position: | chr20:20359799-20359577 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 112-331 |
| Cow position: | chr20:30855768-30855546 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 115-319 |
| Cow position: | chr20:14679609-14679818 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 115-331 |
| Cow position: | chr20:19865242-19865462 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 116-306 |
| Cow position: | chr20:14363148-14362959 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 116-307 |
| Cow position: | chr20:27001382-27001575 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 119-360 |
| Cow position: | chr20:23235028-23235272 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 125-324 |
| Cow position: | chr20:5763294-5763088 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 130-323 |
| Cow position: | chr20:39656254-39656448 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 131-272 |
| Cow position: | chr20:34178466-34178323 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 132-305 |
| Cow position: | chr20:23163896-23163715 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 132-322 |
| Cow position: | chr20:13609058-13608866 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 132-324 |
| Cow position: | chr20:4934064-4933864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 135-340 |
| Cow position: | chr20:220625-220831 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 138-348 |
| Cow position: | chr20:7386571-7386781 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 139-335 |
| Cow position: | chr20:35924767-35924570 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 141-355 |
| Cow position: | chr20:40355147-40355358 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 167-310 |
| Cow position: | chr20:33962783-33962927 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 172-322 |
| Cow position: | chr20:32587408-32587560 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 191-324 |
| Cow position: | chr20:6105080-6104946 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 191-348 |
| Cow position: | chr20:8261989-8262144 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 193-311 |
| Cow position: | chr20:23604659-23604541 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-335 |
| Cow position: | chr20:14471496-14471349 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.