Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 95-324 |
| Cow position: | chr23:16058522-16058748 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 105-310 |
| Cow position: | chr23:11434321-11434109 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 110-338 |
| Cow position: | chr23:20585755-20585521 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 110-367 |
| Cow position: | chr23:14126511-14126772 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 112-280 |
| Cow position: | chr23:29393380-29393554 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 112-338 |
| Cow position: | chr23:23192206-23191984 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 112-339 |
| Cow position: | chr23:21276078-21275838 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 112-346 |
| Cow position: | chr23:16793529-16793768 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 32, 201 |
| Conread position: | 115-347 |
| Cow position: | chr23:7611216-7611448 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 82, 112 |
| Conread position: | 116-324 |
| Cow position: | chr23:28895009-28894789 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 117-338 |
| Cow position: | chr23:36082530-36082765 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 124-331 |
| Cow position: | chr23:17092538-17092320 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 125-304 |
| Cow position: | chr23:26217524-26217706 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 127-335 |
| Cow position: | chr23:1717591-1717372 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 130-382 |
| Cow position: | chr23:13359788-13360051 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 138-347 |
| Cow position: | chr23:9812250-9812049 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 140-348 |
| Cow position: | chr23:22660609-22660399 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 140-381 |
| Cow position: | chr23:4956002-4956243 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 143-361 |
| Cow position: | chr23:40651496-40651269 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 146-288 |
| Cow position: | chr23:13319924-13320067 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 157-357 |
| Cow position: | chr23:11564381-11564182 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 191-335 |
| Cow position: | chr23:19981652-19981507 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 191-346 |
| Cow position: | chr23:28721202-28721050 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 196-324 |
| Cow position: | chr23:1550915-1551043 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-358 |
| Cow position: | chr23:18967839-18967687 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 118, 127 |
Show alignments to all cow chromosomes.