Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 99-353 |
| Cow position: | chr24:6507865-6507602 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 101-335 |
| Cow position: | chr24:32758851-32758612 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 103-359 |
| Cow position: | chr24:40091663-40091398 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 8 |
| Conread position: | 105-339 |
| Cow position: | chr24:31258423-31258186 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 106-323 |
| Cow position: | chr24:31378669-31378886 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 106-335 |
| Cow position: | chr24:17981103-17981335 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 111-307 |
| Cow position: | chr24:39681771-39681972 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 111-347 |
| Cow position: | chr24:19754491-19754740 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 112-299 |
| Cow position: | chr24:11201726-11201533 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 112-306 |
| Cow position: | chr24:19611928-19612128 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 112-316 |
| Cow position: | chr24:27633325-27633530 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 112-318 |
| Cow position: | chr24:25677956-25678157 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 112-338 |
| Cow position: | chr24:34369089-34368854 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 112-346 |
| Cow position: | chr24:30860555-30860795 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 116-324 |
| Cow position: | chr24:28335637-28335424 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 116-335 |
| Cow position: | chr24:32158353-32158125 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 116-347 |
| Cow position: | chr24:40809441-40809205 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 131-311 |
| Cow position: | chr24:35827673-35827863 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 132-386 |
| Cow position: | chr24:1271943-1271679 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 141-335 |
| Cow position: | chr24:28279573-28279773 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 170-349 |
| Cow position: | chr24:36497755-36497573 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 184-339 |
| Cow position: | chr24:15909620-15909775 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 191-319 |
| Cow position: | chr24:41332577-41332449 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-324 |
| Cow position: | chr24:5849365-5849237 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.