Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 99-337 |
| Cow position: | chr27:30365343-30365098 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 101-359 |
| Cow position: | chr27:20765935-20766195 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 106-291 |
| Cow position: | chr27:11416467-11416277 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 110-372 |
| Cow position: | chr27:8430423-8430690 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 112-319 |
| Cow position: | chr27:12244111-12244327 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 176 |
| Conread position: | 112-337 |
| Cow position: | chr27:783716-783486 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 112-348 |
| Cow position: | chr27:19601394-19601144 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 172 |
| Conread position: | 112-377 |
| Cow position: | chr27:12247692-12247427 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 114-335 |
| Cow position: | chr27:25982714-25982936 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 115-353 |
| Cow position: | chr27:13970376-13970614 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 135 |
| Conread position: | 116-322 |
| Cow position: | chr27:14937417-14937632 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 170 |
| Conread position: | 128-335 |
| Cow position: | chr27:25970399-25970189 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 129-360 |
| Cow position: | chr27:13958347-13958587 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 131-335 |
| Cow position: | chr27:21578581-21578793 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 131-338 |
| Cow position: | chr27:1536723-1536948 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 134-392 |
| Cow position: | chr27:30790456-30790202 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 138-319 |
| Cow position: | chr27:23662610-23662795 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 140-313 |
| Cow position: | chr27:21970902-21971078 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 141-362 |
| Cow position: | chr27:13005827-13005605 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 150-347 |
| Cow position: | chr27:10119103-10119313 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 151-335 |
| Cow position: | chr27:16525870-16526059 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 158-337 |
| Cow position: | chr27:25880069-25879882 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 191-338 |
| Cow position: | chr27:18219323-18219179 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 191-375 |
| Cow position: | chr27:1899646-1899828 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 166, 102 |
| Conread position: | 191-451 |
| Cow position: | chr27:17875216-17875471 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 209, 146 |
| Conread position: | 192-324 |
| Cow position: | chr27:9692095-9692224 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.