Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 100-305 |
| Cow position: | chr28:12999030-12999245 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 100-378 |
| Cow position: | chr28:1202303-1202024 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 101-289 |
| Cow position: | chr28:5406492-5406684 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 106-259 |
| Cow position: | chr28:4098771-4098933 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 108-254 |
| Cow position: | chr28:13693696-13693848 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 110-348 |
| Cow position: | chr28:31166039-31165790 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 111-335 |
| Cow position: | chr28:7540213-7539979 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 23, 168 |
| Conread position: | 112-322 |
| Cow position: | chr28:29455709-29455504 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 112-324 |
| Cow position: | chr28:6643336-6643112 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 112-335 |
| Cow position: | chr28:19253427-19253657 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 152 |
| Conread position: | 112-342 |
| Cow position: | chr28:9237262-9237500 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 112-375 |
| Cow position: | chr28:33285166-33284888 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 115-344 |
| Cow position: | chr28:11181214-11180977 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 201 |
| Conread position: | 115-380 |
| Cow position: | chr28:4763826-4764102 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 17, 191 |
| Conread position: | 117-310 |
| Cow position: | chr28:15081971-15081767 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 117-332 |
| Cow position: | chr28:11007148-11007375 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 203 |
| Conread position: | 128-313 |
| Cow position: | chr28:8335923-8336119 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 131-339 |
| Cow position: | chr28:4274875-4274662 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 160-347 |
| Cow position: | chr28:23703410-23703597 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 191-347 |
| Cow position: | chr28:22421950-22421794 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 143 |
| Conread position: | 218-324 |
| Cow position: | chr28:22498436-22498542 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.