Cow genome map
| Conread name: | Ss1.1-rdbla0108_i21.5 |
| Conread position: | 99-310 |
| Cow position: | chr29:7054344-7054560 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 35, 151 |
| Conread position: | 103-364 |
| Cow position: | chr29:18540989-18541245 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 106-322 |
| Cow position: | chr29:16055194-16054976 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 106-324 |
| Cow position: | chr29:37961043-37960816 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 107-324 |
| Cow position: | chr29:4367658-4367885 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 198 |
| Conread position: | 111-335 |
| Cow position: | chr29:1340722-1340955 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 112-322 |
| Cow position: | chr29:14758921-14758702 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 112-338 |
| Cow position: | chr29:6772073-6772307 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 112-356 |
| Cow position: | chr29:21265701-21265954 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 115-312 |
| Cow position: | chr29:25426713-25426509 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 115-322 |
| Cow position: | chr29:26298916-26299129 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 116-307 |
| Cow position: | chr29:13554080-13554282 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 117-365 |
| Cow position: | chr29:29302714-29302460 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 195 |
| Conread position: | 131-307 |
| Cow position: | chr29:19508913-19509089 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 158 |
| Conread position: | 132-335 |
| Cow position: | chr29:5976822-5976618 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 132-360 |
| Cow position: | chr29:34699872-34699648 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 133-324 |
| Cow position: | chr29:18072904-18073099 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 141-324 |
| Cow position: | chr29:7407928-7407743 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 161-335 |
| Cow position: | chr29:19734660-19734834 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-324 |
| Cow position: | chr29:7637530-7637399 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 191-346 |
| Cow position: | chr29:23742233-23742082 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 191-354 |
| Cow position: | chr29:11071656-11071495 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 192-346 |
| Cow position: | chr29:942849-943007 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 192-359 |
| Cow position: | chr29:32080576-32080741 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 197-338 |
| Cow position: | chr29:9662050-9662191 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.