Cow genome map
Conread name: | Ss1.1-rdbla0108_i21.5 |
Conread position: | 63-347 |
Cow position: | chr9:46252951-46252665 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 198 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 37, 86 |
Conread position: | 76-322 |
Cow position: | chr9:27292155-27292409 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 176 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 58, 35 |
Conread position: | 99-322 |
Cow position: | chr9:15006652-15006879 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 178 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 35, 11 |
Conread position: | 99-359 |
Cow position: | chr9:19382428-19382162 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 189 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 10, 18 |
Conread position: | 100-335 |
Cow position: | chr9:4538760-4539004 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 171 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 25, 11 |
Conread position: | 101-318 |
Cow position: | chr9:32847983-32847761 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 101-337 |
Cow position: | chr9:16118822-16118588 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 177 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 103-338 |
Cow position: | chr9:32817044-32817289 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 31, 13 |
Conread position: | 104-345 |
Cow position: | chr9:54206230-54206484 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 183 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 33, 13 |
Conread position: | 106-380 |
Cow position: | chr9:34725419-34725697 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 197 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 27, 11 |
Conread position: | 109-324 |
Cow position: | chr9:40007947-40007728 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 25, 8 |
Conread position: | 110-324 |
Cow position: | chr9:56861095-56860882 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 158 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 110-329 |
Cow position: | chr9:8657344-8657570 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 6, 36 |
Conread position: | 111-338 |
Cow position: | chr9:6203704-6203933 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 37, 199 |
Conread position: | 112-310 |
Cow position: | chr9:41957892-41957686 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 112-335 |
Cow position: | chr9:32266310-32266531 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 65, 19 |
Conread position: | 112-337 |
Cow position: | chr9:14184751-14184523 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 22, 149 |
Conread position: | 112-337 |
Cow position: | chr9:50522263-50522483 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 85, 50 |
Conread position: | 112-338 |
Cow position: | chr9:17110858-17110625 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 22, 73 |
Conread position: | 112-338 |
Cow position: | chr9:34310113-34309880 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 22, 50 |
Conread position: | 112-339 |
Cow position: | chr9:34204218-34203980 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 112-357 |
Cow position: | chr9:10127586-10127833 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 172 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 22, 56 |
Conread position: | 112-359 |
Cow position: | chr9:20039048-20039298 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 180 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 22, 5 |
Conread position: | 115-324 |
Cow position: | chr9:15033989-15033774 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 160 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 19, 102 |
Conread position: | 115-324 |
Cow position: | chr9:48773430-48773219 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 74, 16 |
Conread position: | 116-304 |
Cow position: | chr9:21462784-21462981 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 116-325 |
Cow position: | chr9:9200640-9200857 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 28, 137 |
Conread position: | 116-335 |
Cow position: | chr9:39428714-39428945 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 116-393 |
Cow position: | chr9:29808539-29808260 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 25, 133 |
Conread position: | 118-358 |
Cow position: | chr9:30020049-30019816 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 168 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 119-335 |
Cow position: | chr9:42173117-42173330 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 125-324 |
Cow position: | chr9:5172402-5172199 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 12, 134 |
Conread position: | 131-312 |
Cow position: | chr9:5059252-5059437 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 132 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 131-338 |
Cow position: | chr9:43926045-43926253 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 14, 143 |
Conread position: | 131-358 |
Cow position: | chr9:20896965-20896732 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 166 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 17, 108 |
Conread position: | 131-360 |
Cow position: | chr9:24837605-24837371 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 170 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 17, 182 |
Conread position: | 132-315 |
Cow position: | chr9:64007819-64008007 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 133 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 65, 141 |
Conread position: | 135-347 |
Cow position: | chr9:25469108-25468897 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 65, 15 |
Conread position: | 136-386 |
Cow position: | chr9:33059216-33059469 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 61, 14 |
Conread position: | 140-330 |
Cow position: | chr9:20839683-20839488 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 141-324 |
Cow position: | chr9:18237109-18237291 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 52, 13 |
Conread position: | 141-335 |
Cow position: | chr9:39152626-39152825 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 56, 9 |
Conread position: | 141-358 |
Cow position: | chr9:36827739-36827534 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 159 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 5, 43 |
Conread position: | 150-346 |
Cow position: | chr9:53794483-53794684 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 147 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 38, 80 |
Conread position: | 151-322 |
Cow position: | chr9:35708575-35708751 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 154-360 |
Cow position: | chr9:50827887-50828094 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 150 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 56, 46 |
Conread position: | 156-338 |
Cow position: | chr9:26645954-26645772 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 11 |
Conread position: | 162-338 |
Cow position: | chr9:9761075-9760896 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 35, 58 |
Conread position: | 167-319 |
Cow position: | chr9:11102771-11102929 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 123 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 179-335 |
Cow position: | chr9:2391351-2391196 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 18 |
Conread position: | 179-362 |
Cow position: | chr9:6347005-6346824 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 128 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 191-335 |
Cow position: | chr9:62330999-62331143 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 107 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 65, 60 |
Conread position: | 206-324 |
Cow position: | chr9:21566627-21566745 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.