Cow genome map

Conread name: Ss1.1-rebs25c_d20.5

Conread position: 62-509
Cow position:
Alignm length: 449
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 68-470
Cow position:
Alignm length: 405
Alignm identity: 260
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 341, 319

Conread position: 70-485
Cow position:
Alignm length: 417
Alignm identity: 250
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 249, 256

Conread position: 70-513
Cow position:
Alignm length: 445
Alignm identity: 258
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 441, 0

Conread position: 71-468
Cow position:
Alignm length: 398
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 71-485
Cow position:
Alignm length: 416
Alignm identity: 244
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 248, 255

Conread position: 71-508
Cow position:
Alignm length: 439
Alignm identity: 256
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 329, 335

Conread position: 71-509
Cow position:
Alignm length: 439
Alignm identity: 267
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 71-511
Cow position:
Alignm length: 444
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 16

Conread position: 72-355
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 271, 0

Conread position: 72-467
Cow position:
Alignm length: 396
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 0

Conread position: 72-470
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 72-489
Cow position:
Alignm length: 419
Alignm identity: 262
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 155, 171

Conread position: 72-508
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 153

Conread position: 72-509
Cow position:
Alignm length: 438
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 72-509
Cow position:
Alignm length: 438
Alignm identity: 253
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 72-511
Cow position:
Alignm length: 440
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 72-513
Cow position:
Alignm length: 445
Alignm identity: 279
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 54

Conread position: 72-514
Cow position:
Alignm length: 444
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 412

Conread position: 72-514
Cow position:
Alignm length: 445
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 152

Conread position: 72-514
Cow position:
Alignm length: 445
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 71

Conread position: 73-352
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 252, 239

Conread position: 73-385
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 53

Conread position: 73-416
Cow position:
Alignm length: 346
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 57

Conread position: 73-424
Cow position:
Alignm length: 353
Alignm identity: 226
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 151, 139

Conread position: 73-440
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 147, 153

Conread position: 73-498
Cow position:
Alignm length: 426
Alignm identity: 266
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 73-507
Cow position:
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 73-507
Cow position:
Alignm length: 436
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 336, 331

Conread position: 73-508
Cow position:
Alignm length: 436
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 277
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 169, 159

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 270
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 70

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 235

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 267
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 73-511
Cow position:
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 156

Conread position: 73-511
Cow position:
Alignm length: 441
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 157

Conread position: 73-511
Cow position:
Alignm length: 440
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 53

Conread position: 73-511
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-511
Cow position:
Alignm length: 440
Alignm identity: 277
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 40

Conread position: 73-513
Cow position:
Alignm length: 445
Alignm identity: 283
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 80, 109

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 444
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 163

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 443
Alignm identity: 279
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 164, 170

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 329

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 277
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 274
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 79-514
Cow position:
Alignm length: 436
Alignm identity: 263
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 82-514
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 82-514
Cow position:
Alignm length: 434
Alignm identity: 253
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 315, 326

Conread position: 83-514
Cow position:
Alignm length: 434
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 238

Conread position: 84-509
Cow position:
Alignm length: 426
Alignm identity: 248
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 85-506
Cow position:
Alignm length: 423
Alignm identity: 264
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 61, 74

Conread position: 85-514
Cow position:
Alignm length: 430
Alignm identity: 267
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 85-517
Cow position:
Alignm length: 433
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 90-481
Cow position:
Alignm length: 396
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 125, 14

Conread position: 91-512
Cow position:
Alignm length: 424
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 62, 68

Conread position: 91-514
Cow position:
Alignm length: 424
Alignm identity: 261
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 91-514
Cow position:
Alignm length: 425
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 313

Conread position: 91-517
Cow position:
Alignm length: 428
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 396

Conread position: 99-507
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 128-511
Cow position:
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 43

Conread position: 128-517
Cow position:
Alignm length: 391
Alignm identity: 241
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 237, 241

Conread position: 146-495
Cow position:
Alignm length: 350
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 155-514
Cow position:
Alignm length: 363
Alignm identity: 235
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 69, 64

Conread position: 171-403
Cow position:
Alignm length: 233
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 182-509
Cow position:
Alignm length: 331
Alignm identity: 213
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 5

Conread position: 193-517
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 300, 288

Conread position: 202-485
Cow position:
Alignm length: 284
Alignm identity: 174
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 202-514
Cow position:
Alignm length: 313
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 267-509
Cow position:
Alignm length: 244
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 39

Show alignments to all cow chromosomes.