Cow genome map

Conread name: Ss1.1-rebs25c_d20.5

Conread position: 50-395
Cow position:
Alignm length: 346
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 62-317
Cow position:
Alignm length: 257
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 62-513
Cow position:
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 98

Conread position: 62-514
Cow position:
Alignm length: 454
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 64-485
Cow position:
Alignm length: 425
Alignm identity: 268
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 157, 164

Conread position: 67-461
Cow position:
Alignm length: 395
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 68-417
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 71-507
Cow position:
Alignm length: 447
Alignm identity: 279
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 39

Conread position: 72-372
Cow position:
Alignm length: 303
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 70

Conread position: 72-402
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 152, 146

Conread position: 72-438
Cow position:
Alignm length: 371
Alignm identity: 236
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 80, 87

Conread position: 72-479
Cow position:
Alignm length: 411
Alignm identity: 258
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 92, 99

Conread position: 72-509
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 72-509
Cow position:
Alignm length: 438
Alignm identity: 267
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 72-511
Cow position:
Alignm length: 442
Alignm identity: 274
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 272, 249

Conread position: 72-511
Cow position:
Alignm length: 444
Alignm identity: 282
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 76, 70

Conread position: 72-511
Cow position:
Alignm length: 440
Alignm identity: 259
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 72-513
Cow position:
Alignm length: 444
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 171

Conread position: 72-513
Cow position:
Alignm length: 444
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 256, 263

Conread position: 72-514
Cow position:
Alignm length: 445
Alignm identity: 277
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 85, 79

Conread position: 72-514
Cow position:
Alignm length: 445
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 87

Conread position: 73-339
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 161, 155

Conread position: 73-353
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 169, 164

Conread position: 73-371
Cow position:
Alignm length: 300
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 228, 221

Conread position: 73-378
Cow position:
Alignm length: 308
Alignm identity: 196
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 40

Conread position: 73-401
Cow position:
Alignm length: 330
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 292, 298

Conread position: 73-423
Cow position:
Alignm length: 352
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 170

Conread position: 73-431
Cow position:
Alignm length: 360
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 73-438
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 73-462
Cow position:
Alignm length: 393
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 368, 384

Conread position: 73-467
Cow position:
Alignm length: 395
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 73-469
Cow position:
Alignm length: 403
Alignm identity: 259
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 70

Conread position: 73-469
Cow position:
Alignm length: 398
Alignm identity: 233
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 245, 252

Conread position: 73-470
Cow position:
Alignm length: 399
Alignm identity: 243
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 223, 229

Conread position: 73-479
Cow position:
Alignm length: 407
Alignm identity: 237
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 73-481
Cow position:
Alignm length: 411
Alignm identity: 259
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 46, 40

Conread position: 73-485
Cow position:
Alignm length: 414
Alignm identity: 245
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 310, 306

Conread position: 73-486
Cow position:
Alignm length: 415
Alignm identity: 251
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 164, 170

Conread position: 73-498
Cow position:
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 248

Conread position: 73-506
Cow position:
Alignm length: 435
Alignm identity: 271
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 419, 414

Conread position: 73-506
Cow position:
Alignm length: 435
Alignm identity: 269
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 419, 414

Conread position: 73-506
Cow position:
Alignm length: 437
Alignm identity: 263
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 40

Conread position: 73-508
Cow position:
Alignm length: 437
Alignm identity: 271
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 396, 391

Conread position: 73-508
Cow position:
Alignm length: 437
Alignm identity: 267
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 328, 324

Conread position: 73-509
Cow position:
Alignm length: 441
Alignm identity: 265
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 330

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 263
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 139

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 254
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 151, 145

Conread position: 73-509
Cow position:
Alignm length: 439
Alignm identity: 268
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 40

Conread position: 73-509
Cow position:
Alignm length: 441
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 146

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 273
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 169, 164

Conread position: 73-509
Cow position:
Alignm length: 437
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 414

Conread position: 73-509
Cow position:
Alignm length: 440
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 170

Conread position: 73-509
Cow position:
Alignm length: 438
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 420, 415

Conread position: 73-511
Cow position:
Alignm length: 442
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 55

Conread position: 73-511
Cow position:
Alignm length: 441
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 412

Conread position: 73-511
Cow position:
Alignm length: 439
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-511
Cow position:
Alignm length: 441
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 248

Conread position: 73-511
Cow position:
Alignm length: 441
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 248

Conread position: 73-513
Cow position:
Alignm length: 444
Alignm identity: 277
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 237, 233

Conread position: 73-513
Cow position:
Alignm length: 442
Alignm identity: 275
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 438, 0

Conread position: 73-513
Cow position:
Alignm length: 442
Alignm identity: 277
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 438, 0

Conread position: 73-514
Cow position:
Alignm length: 443
Alignm identity: 272
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 84, 80

Conread position: 73-514
Cow position:
Alignm length: 444
Alignm identity: 269
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 40

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 263
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 268
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 444
Alignm identity: 283
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 84, 78

Conread position: 73-514
Cow position:
Alignm length: 446
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 86

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-514
Cow position:
Alignm length: 443
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 414

Conread position: 73-514
Cow position:
Alignm length: 442
Alignm identity: 274
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 73-515
Cow position:
Alignm length: 446
Alignm identity: 266
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 40

Conread position: 73-516
Cow position:
Alignm length: 444
Alignm identity: 271
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 73-520
Cow position:
Alignm length: 451
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 75

Conread position: 73-531
Cow position:
Alignm length: 462
Alignm identity: 292
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 40

Conread position: 77-509
Cow position:
Alignm length: 433
Alignm identity: 270
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 81-509
Cow position:
Alignm length: 429
Alignm identity: 267
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 81-509
Cow position:
Alignm length: 430
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 320, 316

Conread position: 82-514
Cow position:
Alignm length: 433
Alignm identity: 266
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 82-514
Cow position:
Alignm length: 436
Alignm identity: 262
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 31

Conread position: 82-529
Cow position:
Alignm length: 448
Alignm identity: 281
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 418, 0

Conread position: 83-509
Cow position:
Alignm length: 428
Alignm identity: 254
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 76

Conread position: 83-514
Cow position:
Alignm length: 433
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 70

Conread position: 84-404
Cow position:
Alignm length: 323
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 154

Conread position: 84-481
Cow position:
Alignm length: 398
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 85-467
Cow position:
Alignm length: 384
Alignm identity: 234
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 380, 0

Conread position: 85-479
Cow position:
Alignm length: 396
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 74

Conread position: 85-511
Cow position:
Alignm length: 428
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 234, 241

Conread position: 89-338
Cow position:
Alignm length: 250
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 89-384
Cow position:
Alignm length: 298
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 21

Conread position: 89-517
Cow position:
Alignm length: 437
Alignm identity: 278
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 63

Conread position: 89-517
Cow position:
Alignm length: 435
Alignm identity: 262
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 99

Conread position: 91-535
Cow position:
Alignm length: 452
Alignm identity: 269
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 66

Conread position: 94-514
Cow position:
Alignm length: 421
Alignm identity: 258
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 100-511
Cow position:
Alignm length: 415
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 221

Conread position: 102-509
Cow position:
Alignm length: 409
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 295

Conread position: 109-451
Cow position:
Alignm length: 347
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 320, 0

Conread position: 117-467
Cow position:
Alignm length: 357
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 309, 353

Conread position: 118-513
Cow position:
Alignm length: 399
Alignm identity: 243
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 359, 346

Conread position: 157-456
Cow position:
Alignm length: 301
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 226, 220

Conread position: 157-508
Cow position:
Alignm length: 353
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 86

Conread position: 162-511
Cow position:
Alignm length: 357
Alignm identity: 225
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 95

Conread position: 181-514
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 184-486
Cow position:
Alignm length: 304
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 241, 245

Conread position: 187-511
Cow position:
Alignm length: 327
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 214, 210

Conread position: 202-507
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 125, 120

Conread position: 213-514
Cow position:
Alignm length: 302
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 216-524
Cow position:
Alignm length: 310
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 175, 23

Conread position: 241-514
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 264, 259

Conread position: 265-494
Cow position:
Alignm length: 230
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 272-514
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 44

Conread position: 277-507
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 48

Conread position: 282-513
Cow position:
Alignm length: 234
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 127

Conread position: 283-509
Cow position:
Alignm length: 228
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 210, 204

Show alignments to all cow chromosomes.