Cow genome map
| Conread name: | Ss1.1-rebs25c_d20.5 |
| Conread position: | 56-514 |
| Cow position: | chr21:12659047-12659505 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-509 |
| Cow position: | chr21:34223080-34222636 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 68-513 |
| Cow position: | chr21:12659227-12659673 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 443, 0 |
| Conread position: | 69-482 |
| Cow position: | chr21:12659564-12659977 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 69-511 |
| Cow position: | chr21:12659144-12659586 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 418 |
| Conread position: | 69-513 |
| Cow position: | chr21:12658808-12659253 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 0 |
| Conread position: | 70-468 |
| Cow position: | chr21:12608365-12607967 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-395 |
| Cow position: | chr21:34222906-34222582 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-468 |
| Cow position: | chr21:12608784-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-507 |
| Cow position: | chr21:12608532-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-511 |
| Cow position: | chr21:12658894-12659334 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-525 |
| Cow position: | chr21:12659398-12659849 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 429, 0 |
| Conread position: | 73-357 |
| Cow position: | chr21:12659736-12660020 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-424 |
| Cow position: | chr21:12608278-12607927 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-424 |
| Cow position: | chr21:12659652-12660003 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-509 |
| Cow position: | chr21:12608446-12608010 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 369 |
| Conread position: | 73-509 |
| Cow position: | chr21:12608614-12608178 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 397 |
| Conread position: | 73-509 |
| Cow position: | chr21:34222988-34222552 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 424, 429 |
| Conread position: | 73-511 |
| Cow position: | chr21:12608698-12608260 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-511 |
| Cow position: | chr21:12608866-12608428 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 224 |
| Conread position: | 73-511 |
| Cow position: | chr21:12659316-12659754 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 184 |
| Conread position: | 73-511 |
| Cow position: | chr21:12659484-12659922 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-513 |
| Cow position: | chr21:12658980-12659421 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 438, 0 |
| Conread position: | 84-488 |
| Cow position: | chr21:11852332-11852736 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 270, 264 |
| Conread position: | 128-511 |
| Cow position: | chr21:12608895-12608512 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 253 |
| Conread position: | 223-511 |
| Cow position: | chr21:12658793-12659082 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 316-514 |
| Cow position: | chr21:12658803-12659001 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.