Cow genome map
| Conread name: | Ss1.1-rebs25c_d20.5 |
| Conread position: | 1-72 |
| Cow position: | chr25:3663958-3664029 (view UCSC Genome Browser custom track) |
| Alignm length: | 72 |
| Alignm identity: | 71 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-511 |
| Cow position: | chr25:34473427-34473921 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 36-511 |
| Cow position: | chr25:24399044-24398573 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 63-475 |
| Cow position: | chr25:33298698-33299112 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 70-262 |
| Cow position: | chr25:3664411-3664603 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-405 |
| Cow position: | chr25:22235973-22236308 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 243, 253 |
| Conread position: | 70-479 |
| Cow position: | chr25:33530289-33530698 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-511 |
| Cow position: | chr25:3636502-3636061 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 389 |
| Conread position: | 70-517 |
| Cow position: | chr25:33530373-33530821 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 71-430 |
| Cow position: | chr25:3664244-3664602 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 338 |
| Conread position: | 71-498 |
| Cow position: | chr25:33530040-33530465 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 7 |
| Conread position: | 71-509 |
| Cow position: | chr25:33157496-33157058 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-288 |
| Cow position: | chr25:4657235-4657018 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 72-339 |
| Cow position: | chr25:3676138-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-343 |
| Cow position: | chr25:24398676-24398405 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-378 |
| Cow position: | chr25:22941315-22941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 72-384 |
| Cow position: | chr25:25653006-25653318 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-397 |
| Cow position: | chr25:326559-326884 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 296, 291 |
| Conread position: | 72-408 |
| Cow position: | chr25:33529160-33529497 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 248 |
| Conread position: | 72-417 |
| Cow position: | chr25:3676054-3676399 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-417 |
| Cow position: | chr25:24385018-24384673 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 272, 277 |
| Conread position: | 72-428 |
| Cow position: | chr25:3636332-3635976 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 331, 337 |
| Conread position: | 72-429 |
| Cow position: | chr25:3637028-3636671 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 185, 198 |
| Conread position: | 72-506 |
| Cow position: | chr25:33298961-33299395 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-509 |
| Cow position: | chr25:33157243-33156806 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 72-509 |
| Cow position: | chr25:36844642-36844214 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 72-511 |
| Cow position: | chr25:33530207-33530646 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 239 |
| Conread position: | 73-327 |
| Cow position: | chr25:34733946-34733692 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 145 |
| Conread position: | 73-354 |
| Cow position: | chr25:34473822-34474100 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 267, 42 |
| Conread position: | 73-395 |
| Cow position: | chr25:36800946-36801268 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 73-401 |
| Cow position: | chr25:34447085-34447413 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 312, 306 |
| Conread position: | 73-423 |
| Cow position: | chr25:33127865-33128215 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 296, 291 |
| Conread position: | 73-423 |
| Cow position: | chr25:34763393-34763740 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 73-437 |
| Cow position: | chr25:33506811-33507174 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 253 |
| Conread position: | 73-440 |
| Cow position: | chr25:33157326-33156959 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 170 |
| Conread position: | 73-451 |
| Cow position: | chr25:4657402-4657023 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 73-467 |
| Cow position: | chr25:34770145-34769752 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 73-468 |
| Cow position: | chr25:33299046-33299441 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-468 |
| Cow position: | chr25:33299214-33299609 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-469 |
| Cow position: | chr25:24385101-24384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 73-470 |
| Cow position: | chr25:34770061-34769664 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 73-471 |
| Cow position: | chr25:22235892-22236290 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-485 |
| Cow position: | chr25:3663994-3664406 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 73-485 |
| Cow position: | chr25:25652839-25653251 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-490 |
| Cow position: | chr25:33298878-33299294 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 414, 0 |
| Conread position: | 73-494 |
| Cow position: | chr25:33529077-33529498 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-495 |
| Cow position: | chr25:24385185-24384763 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 73-507 |
| Cow position: | chr25:3664078-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 414 |
| Conread position: | 73-507 |
| Cow position: | chr25:25652251-25652685 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-508 |
| Cow position: | chr25:34763309-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 239, 145 |
| Conread position: | 73-509 |
| Cow position: | chr25:33157410-33156974 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 146 |
| Conread position: | 73-509 |
| Cow position: | chr25:33298794-33299230 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 73-509 |
| Cow position: | chr25:34762892-34763325 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 163, 170 |
| Conread position: | 73-509 |
| Cow position: | chr25:34763141-34763574 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 0 |
| Conread position: | 73-511 |
| Cow position: | chr25:326644-327088 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 220, 300 |
| Conread position: | 73-511 |
| Cow position: | chr25:25652335-25652773 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-511 |
| Cow position: | chr25:25652503-25652941 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 57 |
| Conread position: | 73-511 |
| Cow position: | chr25:25652671-25653109 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 73-511 |
| Cow position: | chr25:25652755-25653193 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-511 |
| Cow position: | chr25:33530124-33530562 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-512 |
| Cow position: | chr25:34473654-34474091 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 146 |
| Conread position: | 73-513 |
| Cow position: | chr25:25652587-25653028 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 324 |
| Conread position: | 73-514 |
| Cow position: | chr25:34473570-34474008 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 0 |
| Conread position: | 73-519 |
| Cow position: | chr25:25652419-25652866 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 73-525 |
| Cow position: | chr25:3636415-3635960 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 248 |
| Conread position: | 73-531 |
| Cow position: | chr25:25652923-25653378 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 407 |
| Conread position: | 73-611 |
| Cow position: | chr25:3664162-3664700 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 488, 469 |
| Conread position: | 79-486 |
| Cow position: | chr25:24385263-24384856 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 79-511 |
| Cow position: | chr25:24385347-24384915 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 81-412 |
| Cow position: | chr25:34734023-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 81-479 |
| Cow position: | chr25:34769885-34769487 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-485 |
| Cow position: | chr25:34447010-34447413 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 82-509 |
| Cow position: | chr25:33127790-33128217 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 301, 294 |
| Conread position: | 83-516 |
| Cow position: | chr25:4657476-4657045 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 60 |
| Conread position: | 84-468 |
| Cow position: | chr25:22940526-22940142 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 93 |
| Conread position: | 85-401 |
| Cow position: | chr25:326488-326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 85-522 |
| Cow position: | chr25:23267421-23266990 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 284, 122 |
| Conread position: | 87-509 |
| Cow position: | chr25:33127711-33128133 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 380, 373 |
| Conread position: | 89-499 |
| Cow position: | chr25:3675987-3676397 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 89-508 |
| Cow position: | chr25:36801538-36801957 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 400, 391 |
| Conread position: | 89-535 |
| Cow position: | chr25:3663926-3664368 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 422, 0 |
| Conread position: | 91-509 |
| Cow position: | chr25:33299148-33299566 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-511 |
| Cow position: | chr25:25652187-25652605 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-423 |
| Cow position: | chr25:24398738-24398409 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 99-462 |
| Cow position: | chr25:22941372-22941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 99-514 |
| Cow position: | chr25:3636557-3636142 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 104-511 |
| Cow position: | chr25:24385406-24384999 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 108-512 |
| Cow position: | chr25:33529028-33529432 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-513 |
| Cow position: | chr25:34762844-34763246 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 212, 216 |
| Conread position: | 117-469 |
| Cow position: | chr25:22235852-22236204 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 111, 122 |
| Conread position: | 118-472 |
| Cow position: | chr25:33506772-33507126 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 291 |
| Conread position: | 128-509 |
| Cow position: | chr25:33157523-33157142 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 363, 359 |
| Conread position: | 128-511 |
| Cow position: | chr25:33127668-33128051 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 363, 359 |
| Conread position: | 140-507 |
| Cow position: | chr25:346494-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-450 |
| Cow position: | chr25:36844655-36844348 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 156-513 |
| Cow position: | chr25:33298625-33298983 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 355, 0 |
| Conread position: | 162-511 |
| Cow position: | chr25:3663915-3664264 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-507 |
| Cow position: | chr25:34734023-34733680 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 174-517 |
| Cow position: | chr25:33529011-33529353 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 180-495 |
| Cow position: | chr25:24398736-24398421 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 53 |
| Conread position: | 181-485 |
| Cow position: | chr25:326501-326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 128, 6 |
| Conread position: | 184-483 |
| Cow position: | chr25:24385410-24385111 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 225, 219 |
| Conread position: | 190-511 |
| Cow position: | chr25:33157545-33157224 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 193-468 |
| Cow position: | chr25:22941362-22941087 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 200-513 |
| Cow position: | chr25:22235851-22236165 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 201-468 |
| Cow position: | chr25:3637070-3636800 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 247 |
| Conread position: | 202-495 |
| Cow position: | chr25:33506772-33507065 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 270 |
| Conread position: | 202-511 |
| Cow position: | chr25:22940492-22940183 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 122 |
| Conread position: | 220-526 |
| Cow position: | chr25:3636604-3636302 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 265-511 |
| Cow position: | chr25:326501-326746 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 265-511 |
| Cow position: | chr25:3675995-3676241 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 277-514 |
| Cow position: | chr25:33530076-33530313 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-525 |
| Cow position: | chr25:33506769-33507014 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 330-511 |
| Cow position: | chr25:25652172-25652353 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 337-513 |
| Cow position: | chr25:326488-326665 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 624-787 |
| Cow position: | chr25:3664680-3664835 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 65 |
Show alignments to all cow chromosomes.