Cow genome map


           Conread name:
           Ss1.1-rebs25c_d20.5
        

               Conread position:
               1-511
               

               Cow position:
               chr3:20194641-20195139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               490, 56
               

               Conread position:
               66-401
               

               Cow position:
               chr3:20194946-20195281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-268
               

               Cow position:
               chr3:20194508-20194703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               72-509
               

               Cow position:
               chr3:20194784-20195221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 325
               

               Conread position:
               73-507
               

               Cow position:
               chr3:20194869-20195303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 248
               

               Conread position:
               89-352
               

               Cow position:
               chr3:20194441-20194703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               255, 230
               

               Conread position:
               175-423
               

               Cow position:
               chr3:63430872-63431120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               112, 105
               

               Conread position:
               202-436
               

               Cow position:
               chr3:20194470-20194706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               206, 201
               

               Conread position:
               226-485
               

               Cow position:
               chr3:20194411-20194669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               336-511
               

               Cow position:
               chr3:20194436-20194611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.