Cow genome map


           Conread name:
           Ss1.1-rebs25c_d20.5
        

               Conread position:
               9-509
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               45-528
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               306
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               47-437
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               63-514
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 255
               

               Conread position:
               69-414
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               69-508
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-416
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               153, 46
               

               Conread position:
               70-467
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 163
               

               Conread position:
               70-514
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               162, 148
               

               Conread position:
               72-347
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               72-348
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               72-352
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               151, 103
               

               Conread position:
               72-430
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 153
               

               Conread position:
               72-469
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               331, 92
               

               Conread position:
               72-471
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               72-471
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 250
               

               Conread position:
               73-255
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               159, 145
               

               Conread position:
               73-428
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               240, 233
               

               Conread position:
               73-430
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               162, 154
               

               Conread position:
               73-511
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               73-513
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               236, 253
               

               Conread position:
               75-474
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 14
               

               Conread position:
               79-512
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 154
               

               Conread position:
               91-506
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               128, 142
               

               Conread position:
               91-507
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               126, 142
               

               Conread position:
               94-511
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 51
               

               Conread position:
               97-511
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 136
               

               Conread position:
               101-345
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               108-345
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 125
               

               Conread position:
               139-510
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               147-511
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               175-490
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               175, 240
               

               Conread position:
               178-344
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               184-391
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 49
               

               Conread position:
               187-513
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               192-472
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 127
               

               Conread position:
               202-430
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               264-511
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               127, 136
               

               Conread position:
               267-472
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-508
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               276-507
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               198, 207
               

               Conread position:
               282-522
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.