Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 2-633 |
| Cow position: | chr13:24162459-24163090 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 3-459 |
| Cow position: | chr13:39930705-39931159 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 436, 0 |
| Conread position: | 3-611 |
| Cow position: | chr13:24162796-24163404 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 195 |
| Conread position: | 3-628 |
| Cow position: | chr13:22125070-22125695 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 195 |
| Conread position: | 3-651 |
| Cow position: | chr13:22124902-22125551 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 3-651 |
| Cow position: | chr13:22125238-22125887 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 3-651 |
| Cow position: | chr13:24162628-24163277 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 3-651 |
| Cow position: | chr13:24162964-24163613 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 189 |
| Conread position: | 3-654 |
| Cow position: | chr13:22125154-22125806 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 327 |
| Conread position: | 3-655 |
| Cow position: | chr13:24162712-24163364 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 490, 495 |
| Conread position: | 7-506 |
| Cow position: | chr13:22125410-22125909 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 141 |
| Conread position: | 7-506 |
| Cow position: | chr13:24163136-24163635 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 134, 141 |
| Conread position: | 7-655 |
| Cow position: | chr13:24162884-24163533 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 323 |
| Conread position: | 8-341 |
| Cow position: | chr13:22125579-22125912 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 133, 140 |
| Conread position: | 8-341 |
| Cow position: | chr13:24163305-24163638 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 133, 140 |
| Conread position: | 8-645 |
| Cow position: | chr13:22124823-22125460 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 140 |
| Conread position: | 8-645 |
| Cow position: | chr13:24162549-24163186 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 140 |
| Conread position: | 8-655 |
| Cow position: | chr13:22124991-22125638 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 485, 490 |
| Conread position: | 9-558 |
| Cow position: | chr13:39930627-39931174 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 401 |
| Conread position: | 20-593 |
| Cow position: | chr13:22125339-22125912 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 20-593 |
| Cow position: | chr13:24163065-24163638 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 50-645 |
| Cow position: | chr13:22124697-22125292 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 50-645 |
| Cow position: | chr13:24162423-24163018 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 93-634 |
| Cow position: | chr13:39930627-39931166 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 317 |
| Conread position: | 134-645 |
| Cow position: | chr13:39930584-39931095 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 251-655 |
| Cow position: | chr13:22124730-22125134 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 251-655 |
| Cow position: | chr13:24162456-24162860 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 233 |
| Conread position: | 292-651 |
| Cow position: | chr13:39930574-39930934 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 302-655 |
| Cow position: | chr13:22124697-22125050 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 259, 266 |
| Conread position: | 302-655 |
| Cow position: | chr13:24162423-24162776 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 259, 266 |
| Conread position: | 376-651 |
| Cow position: | chr13:22124687-22124963 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 376-651 |
| Cow position: | chr13:24162413-24162689 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 137, 130 |
Show alignments to all cow chromosomes.