Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 1-655 |
| Cow position: | chr17:44467498-44468152 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 251 |
| Conread position: | 2-655 |
| Cow position: | chr17:41440980-41440327 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-655 |
| Cow position: | chr17:41441064-41440411 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 192 |
| Conread position: | 3-365 |
| Cow position: | chr17:41440559-41440198 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 0 |
| Conread position: | 3-693 |
| Cow position: | chr17:22552288-22551598 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 397 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 4-626 |
| Cow position: | chr17:41440810-41440188 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 111 |
| Conread position: | 4-709 |
| Cow position: | chr17:44467669-44468374 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 234 |
| Conread position: | 6-276 |
| Cow position: | chr17:45350849-45350579 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 6-543 |
| Cow position: | chr17:41440724-41440187 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 6-655 |
| Cow position: | chr17:41440892-41440243 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 246 |
| Conread position: | 7-542 |
| Cow position: | chr17:44467840-44468375 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 231 |
| Conread position: | 7-694 |
| Cow position: | chr17:44467588-44468275 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 232 |
| Conread position: | 8-582 |
| Cow position: | chr17:22452316-22451742 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 344 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 240, 253 |
| Conread position: | 8-626 |
| Cow position: | chr17:22499162-22498544 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 351 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 244, 229 |
| Conread position: | 8-655 |
| Cow position: | chr17:22552871-22552224 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 373 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 243, 230 |
| Conread position: | 8-656 |
| Cow position: | chr17:22552367-22551719 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 385 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 142, 138 |
| Conread position: | 20-655 |
| Cow position: | chr17:44467433-44468068 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 218 |
| Conread position: | 23-358 |
| Cow position: | chr17:45350916-45350581 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 237, 218 |
| Conread position: | 32-655 |
| Cow position: | chr17:41441118-41440495 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 252 |
| Conread position: | 35-688 |
| Cow position: | chr17:44467364-44468020 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 203 |
| Conread position: | 101-655 |
| Cow position: | chr17:22452391-22451837 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 110-661 |
| Cow position: | chr17:22553105-22552554 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 141, 135 |
| Conread position: | 118-444 |
| Cow position: | chr17:45350905-45350579 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 204, 212 |
| Conread position: | 202-655 |
| Cow position: | chr17:44467363-44467816 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 390 |
| Conread position: | 203-528 |
| Cow position: | chr17:45350904-45350579 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 203-712 |
| Cow position: | chr17:41441115-41440609 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 49 |
| Conread position: | 276-611 |
| Cow position: | chr17:45350914-45350580 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 303, 7 |
Show alignments to all cow chromosomes.