Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 1-542 |
| Cow position: | chr19:20635577-20635033 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 3-660 |
| Cow position: | chr19:14940217-14940874 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 385 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 189, 210 |
| Conread position: | 4-374 |
| Cow position: | chr19:23597343-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 246, 237 |
| Conread position: | 6-249 |
| Cow position: | chr19:17615162-17615406 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 6-449 |
| Cow position: | chr19:23650038-23650481 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 56 |
| Conread position: | 6-531 |
| Cow position: | chr19:23649954-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 140 |
| Conread position: | 6-559 |
| Cow position: | chr19:23597177-23597731 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 408 |
| Conread position: | 7-509 |
| Cow position: | chr19:14940557-14941059 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 241, 245 |
| Conread position: | 7-654 |
| Cow position: | chr19:14940137-14940784 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 320 |
| Conread position: | 7-655 |
| Cow position: | chr19:14960076-14959444 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 385 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 239, 252 |
| Conread position: | 8-573 |
| Cow position: | chr19:14960325-14959764 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 398, 167 |
| Conread position: | 8-611 |
| Cow position: | chr19:23649872-23650475 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 250 |
| Conread position: | 8-626 |
| Cow position: | chr19:23597095-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-655 |
| Cow position: | chr19:23596930-23597574 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 8-655 |
| Cow position: | chr19:23649284-23649931 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 142 |
| Conread position: | 8-655 |
| Cow position: | chr19:23649368-23650015 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 8-709 |
| Cow position: | chr19:23649452-23650152 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 402 |
| Conread position: | 34-371 |
| Cow position: | chr19:17615106-17615442 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 44-654 |
| Cow position: | chr19:23597047-23597657 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 366 |
| Conread position: | 44-655 |
| Cow position: | chr19:14940426-14941037 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 355 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 569, 574 |
| Conread position: | 76-655 |
| Cow position: | chr19:23596914-23597490 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 116 |
| Conread position: | 92-432 |
| Cow position: | chr19:14948401-14948061 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 319, 306 |
| Conread position: | 136-430 |
| Cow position: | chr19:17615124-17615418 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 186, 199 |
| Conread position: | 212-508 |
| Cow position: | chr19:17615116-17615412 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 260-598 |
| Cow position: | chr19:14948401-14948063 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 156, 170 |
| Conread position: | 272-653 |
| Cow position: | chr19:14948470-14948092 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 320, 21 |
| Conread position: | 283-601 |
| Cow position: | chr19:17615103-17615421 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 85, 79 |
Show alignments to all cow chromosomes.