Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 6-349 |
| Cow position: | chr22:11641088-11641431 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-593 |
| Cow position: | chr22:12399362-12398775 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 344 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 150, 140 |
| Conread position: | 6-655 |
| Cow position: | chr22:11640668-11641317 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 140 |
| Conread position: | 6-655 |
| Cow position: | chr22:12385606-12384955 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 377 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 7-488 |
| Cow position: | chr22:11701164-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 7-572 |
| Cow position: | chr22:12432013-12431448 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 233, 240 |
| Conread position: | 7-591 |
| Cow position: | chr22:12458377-12457793 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 165, 170 |
| Conread position: | 7-655 |
| Cow position: | chr22:12476326-12475678 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 176 |
| Conread position: | 7-670 |
| Cow position: | chr22:11640753-11641415 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 8-192 |
| Cow position: | chr22:12418627-12418443 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 72 |
| Conread position: | 8-526 |
| Cow position: | chr22:12418963-12418445 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 190 |
| Conread position: | 8-570 |
| Cow position: | chr22:12431592-12431030 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 330 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 310, 303 |
| Conread position: | 8-577 |
| Cow position: | chr22:12399444-12398875 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 344 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 8-655 |
| Cow position: | chr22:12399528-12398881 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 390 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 148, 155 |
| Conread position: | 8-655 |
| Cow position: | chr22:12431928-12431281 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 360 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 507, 517 |
| Conread position: | 8-655 |
| Cow position: | chr22:12432096-12431449 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 376 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 8-655 |
| Cow position: | chr22:12498934-12499581 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 387 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 402, 390 |
| Conread position: | 8-683 |
| Cow position: | chr22:12458460-12457785 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 396 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 319, 306 |
| Conread position: | 12-572 |
| Cow position: | chr22:12458624-12458064 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 326 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 227, 240 |
| Conread position: | 12-655 |
| Cow position: | chr22:46654081-46654724 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 373 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 17-458 |
| Cow position: | chr22:12499531-12499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 389, 393 |
| Conread position: | 17-460 |
| Cow position: | chr22:11641015-11641458 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 23-151 |
| Cow position: | chr22:14293681-14293553 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 25-572 |
| Cow position: | chr22:11701098-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 338 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 127, 121 |
| Conread position: | 26-547 |
| Cow position: | chr22:11666445-11666966 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 310 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 126, 120 |
| Conread position: | 44-620 |
| Cow position: | chr22:12419011-12418435 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 194 |
| Conread position: | 50-709 |
| Cow position: | chr22:11640628-11641286 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 120 |
| Conread position: | 109-655 |
| Cow position: | chr22:11701098-11701644 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 152, 142 |
| Conread position: | 110-572 |
| Cow position: | chr22:11666445-11666907 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 150, 136 |
| Conread position: | 134-564 |
| Cow position: | chr22:12458586-12458156 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 166-655 |
| Cow position: | chr22:12476335-12475846 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 238, 228 |
| Conread position: | 166-655 |
| Cow position: | chr22:12498924-12499413 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 236, 229 |
| Conread position: | 205-655 |
| Cow position: | chr22:11666456-11666906 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 272-588 |
| Cow position: | chr22:12458532-12458216 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 134, 151 |
| Conread position: | 301-655 |
| Cow position: | chr22:12419006-12418652 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-621 |
| Cow position: | chr22:12498916-12499211 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 244, 237 |
| Conread position: | 326-655 |
| Cow position: | chr22:12476343-12476014 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 244, 234 |
| Conread position: | 446-571 |
| Cow position: | chr22:14293678-14293553 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.