Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 1-457 |
| Cow position: | chr25:23266966-23266512 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 200, 178 |
| Conread position: | 1-459 |
| Cow position: | chr25:34447246-34447704 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 151, 145 |
| Conread position: | 1-537 |
| Cow position: | chr25:326721-327263 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 153, 145 |
| Conread position: | 1-655 |
| Cow position: | chr25:34762885-34763533 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 1-874 |
| Cow position: | chr25:25652664-25653539 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 841 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 808, 0 |
| Conread position: | 2-264 |
| Cow position: | chr25:427302-427564 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-433 |
| Cow position: | chr25:34473648-34474076 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 171 |
| Conread position: | 2-539 |
| Cow position: | chr25:23267523-23266993 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 208 |
| Conread position: | 3-235 |
| Cow position: | chr25:33529240-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-235 |
| Cow position: | chr25:34733951-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-446 |
| Cow position: | chr25:3664157-3664600 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 3-508 |
| Cow position: | chr25:3664073-3664579 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 503, 0 |
| Conread position: | 3-582 |
| Cow position: | chr25:34769897-34769319 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 5 |
| Conread position: | 3-590 |
| Cow position: | chr25:34732550-34731963 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 341 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 245, 256 |
| Conread position: | 3-654 |
| Cow position: | chr25:34769982-34769331 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 3-655 |
| Cow position: | chr25:25652582-25653234 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-685 |
| Cow position: | chr25:25652498-25653180 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 4-200 |
| Cow position: | chr25:33530624-33530820 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-240 |
| Cow position: | chr25:24384937-24384701 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 4-372 |
| Cow position: | chr25:4657406-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 4-655 |
| Cow position: | chr25:24385357-24384706 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 247 |
| Conread position: | 4-661 |
| Cow position: | chr25:33530120-33530777 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 248 |
| Conread position: | 5-403 |
| Cow position: | chr25:33529074-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-446 |
| Cow position: | chr25:24398843-24398405 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 5-462 |
| Cow position: | chr25:34769728-34769271 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 243, 233 |
| Conread position: | 5-530 |
| Cow position: | chr25:24398927-24398405 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 133, 146 |
| Conread position: | 5-655 |
| Cow position: | chr25:34762973-34763617 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 146 |
| Conread position: | 5-655 |
| Cow position: | chr25:34770148-34769498 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 393 |
| Conread position: | 6-179 |
| Cow position: | chr25:34733864-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-488 |
| Cow position: | chr25:24385187-24384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 137 |
| Conread position: | 6-576 |
| Cow position: | chr25:33157328-33156758 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 337 |
| Conread position: | 6-582 |
| Cow position: | chr25:33157412-33156836 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 232 |
| Conread position: | 6-655 |
| Cow position: | chr25:25652333-25652982 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-656 |
| Cow position: | chr25:33298876-33299526 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 253 |
| Conread position: | 7-191 |
| Cow position: | chr25:427391-427575 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-205 |
| Cow position: | chr25:34473902-34474100 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-290 |
| Cow position: | chr25:33127948-33128231 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 143, 136 |
| Conread position: | 7-365 |
| Cow position: | chr25:33530459-33530817 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-372 |
| Cow position: | chr25:33506810-33507174 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 327 |
| Conread position: | 7-614 |
| Cow position: | chr25:3663993-3664600 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 220 |
| Conread position: | 7-684 |
| Cow position: | chr25:25652250-25652930 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 656, 0 |
| Conread position: | 8-286 |
| Cow position: | chr25:3636247-3635969 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-337 |
| Cow position: | chr25:33529161-33529490 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-345 |
| Cow position: | chr25:22235976-22236313 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 230, 244 |
| Conread position: | 8-387 |
| Cow position: | chr25:3676055-3676432 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 320 |
| Conread position: | 8-403 |
| Cow position: | chr25:3636415-3636020 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-459 |
| Cow position: | chr25:33305339-33304893 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 240, 21 |
| Conread position: | 8-541 |
| Cow position: | chr25:34473570-34474100 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 237 |
| Conread position: | 8-611 |
| Cow position: | chr25:34763141-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 240 |
| Conread position: | 8-621 |
| Cow position: | chr25:326560-327179 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 8-622 |
| Cow position: | chr25:33299214-33299828 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 397, 402 |
| Conread position: | 8-645 |
| Cow position: | chr25:34763060-34763691 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 61 |
| Conread position: | 8-649 |
| Cow position: | chr25:36800694-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 161 |
| Conread position: | 8-655 |
| Cow position: | chr25:25652419-25653066 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-655 |
| Cow position: | chr25:34770061-34769414 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 138 |
| Conread position: | 8-656 |
| Cow position: | chr25:33298626-33299274 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 8-656 |
| Cow position: | chr25:33298962-33299610 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-656 |
| Cow position: | chr25:33299046-33299694 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-655 |
| Cow position: | chr25:36800611-36801257 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 388 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 10-596 |
| Cow position: | chr25:22940535-22939949 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 16-370 |
| Cow position: | chr25:3636323-3635969 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 322, 327 |
| Conread position: | 16-615 |
| Cow position: | chr25:24399000-24398404 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 18-456 |
| Cow position: | chr25:4657476-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-313 |
| Cow position: | chr25:22941303-22941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 19-533 |
| Cow position: | chr25:33530303-33530817 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 302 |
| Conread position: | 19-572 |
| Cow position: | chr25:24385258-24384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 20-233 |
| Cow position: | chr25:22941218-22941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-415 |
| Cow position: | chr25:36844545-36844163 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 20-531 |
| Cow position: | chr25:3636487-3635976 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 206 |
| Conread position: | 20-610 |
| Cow position: | chr25:33530220-33530810 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-656 |
| Cow position: | chr25:33298722-33299358 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-446 |
| Cow position: | chr25:33506741-33507166 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 397 |
| Conread position: | 22-655 |
| Cow position: | chr25:25652181-25652814 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 216 |
| Conread position: | 23-442 |
| Cow position: | chr25:3675986-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 236 |
| Conread position: | 23-774 |
| Cow position: | chr25:3663925-3664674 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 643, 633 |
| Conread position: | 25-347 |
| Cow position: | chr25:34734013-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 144 |
| Conread position: | 26-189 |
| Cow position: | chr25:24398192-24398029 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-455 |
| Cow position: | chr25:36844623-36844203 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 222, 226 |
| Conread position: | 26-588 |
| Cow position: | chr25:33144846-33145405 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 193 |
| Conread position: | 26-590 |
| Cow position: | chr25:33299148-33299712 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-622 |
| Cow position: | chr25:36801372-36801968 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 345 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 463, 472 |
| Conread position: | 29-656 |
| Cow position: | chr25:36801219-36801834 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 460, 122 |
| Conread position: | 29-668 |
| Cow position: | chr25:33530061-33530699 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 223 |
| Conread position: | 30-504 |
| Cow position: | chr25:326330-326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 131 |
| Conread position: | 31-598 |
| Cow position: | chr25:34473509-34474073 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 207 |
| Conread position: | 31-656 |
| Cow position: | chr25:33298565-33299190 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 221 |
| Conread position: | 32-535 |
| Cow position: | chr25:33127721-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 181 |
| Conread position: | 44-610 |
| Cow position: | chr25:3636547-3635981 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 546, 551 |
| Conread position: | 49-626 |
| Cow position: | chr25:326517-327100 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 349 |
| Conread position: | 49-681 |
| Cow position: | chr25:24399207-24398590 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 419, 161 |
| Conread position: | 50-654 |
| Cow position: | chr25:33157452-33156848 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 188 |
| Conread position: | 52-397 |
| Cow position: | chr25:22941354-22941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 52-505 |
| Cow position: | chr25:33529037-33529490 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 200 |
| Conread position: | 57-541 |
| Cow position: | chr25:23266994-23266512 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 59-645 |
| Cow position: | chr25:34762859-34763442 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 0 |
| Conread position: | 62-597 |
| Cow position: | chr25:33127667-33128202 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 62-626 |
| Cow position: | chr25:33157524-33156960 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 64-656 |
| Cow position: | chr25:36800582-36801174 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 359 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 196, 190 |
| Conread position: | 70-695 |
| Cow position: | chr25:3636605-3635980 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 75-655 |
| Cow position: | chr25:24385370-24384790 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 246 |
| Conread position: | 78-403 |
| Cow position: | chr25:34734041-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 26 |
| Conread position: | 78-619 |
| Cow position: | chr25:23267528-23266997 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 25 |
| Conread position: | 82-685 |
| Cow position: | chr25:33530028-33530633 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 169 |
| Conread position: | 90-694 |
| Cow position: | chr25:33157580-33156976 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 92-516 |
| Cow position: | chr25:22235892-22236316 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 324, 338 |
| Conread position: | 98-681 |
| Cow position: | chr25:25652173-25652756 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 154 |
| Conread position: | 110-655 |
| Cow position: | chr25:24398990-24398448 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 112-526 |
| Cow position: | chr25:3675991-3676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 125 |
| Conread position: | 113-656 |
| Cow position: | chr25:33298479-33299022 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 330 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 114-645 |
| Cow position: | chr25:326330-326861 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 132 |
| Conread position: | 114-706 |
| Cow position: | chr25:22235749-22236338 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 47 |
| Conread position: | 115-566 |
| Cow position: | chr25:4657463-4657011 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 123 |
| Conread position: | 115-646 |
| Cow position: | chr25:34473509-34474037 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 314 |
| Conread position: | 118-481 |
| Cow position: | chr25:22941372-22941009 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 123-655 |
| Cow position: | chr25:24385406-24384874 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 356 |
| Conread position: | 127-575 |
| Cow position: | chr25:33529028-33529476 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 134-403 |
| Cow position: | chr25:3637072-3636800 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 134-494 |
| Cow position: | chr25:33506769-33507129 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 141-610 |
| Cow position: | chr25:23266994-23266526 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 228, 206 |
| Conread position: | 145-447 |
| Cow position: | chr25:427277-427580 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 146-655 |
| Cow position: | chr25:33127667-33128176 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 150-654 |
| Cow position: | chr25:34770171-34769667 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 196-873 |
| Cow position: | chr25:25652187-25652869 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 515, 572 |
| Conread position: | 203-404 |
| Cow position: | chr25:5034951-5034750 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 203-588 |
| Cow position: | chr25:346454-346839 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 203, 212 |
| Conread position: | 203-694 |
| Cow position: | chr25:34473513-34474001 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 117 |
| Conread position: | 206-541 |
| Cow position: | chr25:3637084-3636743 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 62, 330 |
| Conread position: | 208-609 |
| Cow position: | chr25:4657454-4657053 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 211-651 |
| Cow position: | chr25:34446952-34447392 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-655 |
| Cow position: | chr25:33529028-33529472 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-576 |
| Cow position: | chr25:33506763-33507127 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 212-582 |
| Cow position: | chr25:22941362-22940994 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 212-635 |
| Cow position: | chr25:326344-326769 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 117 |
| Conread position: | 213-649 |
| Cow position: | chr25:33506686-33507116 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 220-598 |
| Cow position: | chr25:3676015-3676393 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 221-515 |
| Cow position: | chr25:34733985-34733691 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-715 |
| Cow position: | chr25:23266994-23266507 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 246-665 |
| Cow position: | chr25:3675957-3676377 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 0 |
| Conread position: | 260-531 |
| Cow position: | chr25:427308-427580 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 268-598 |
| Cow position: | chr25:34734023-34733692 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 154 |
| Conread position: | 272-655 |
| Cow position: | chr25:22940525-22940142 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 274-570 |
| Cow position: | chr25:34732615-34732319 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 156 |
| Conread position: | 275-655 |
| Cow position: | chr25:36844626-36844255 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 276-654 |
| Cow position: | chr25:33144844-33145219 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 191, 0 |
| Conread position: | 283-655 |
| Cow position: | chr25:24385414-24385042 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 284-653 |
| Cow position: | chr25:22941374-22941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 285-488 |
| Cow position: | chr25:5034953-5034750 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-655 |
| Cow position: | chr25:4657460-4657091 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-655 |
| Cow position: | chr25:34762840-34763200 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 292-649 |
| Cow position: | chr25:414685-414329 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 331, 217 |
| Conread position: | 296-655 |
| Cow position: | chr25:326344-326703 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 313-588 |
| Cow position: | chr25:427277-427552 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 326-655 |
| Cow position: | chr25:34770163-34769834 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 246, 240 |
| Conread position: | 333-655 |
| Cow position: | chr25:34446990-34447312 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 352-655 |
| Cow position: | chr25:34734023-34733719 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 355-694 |
| Cow position: | chr25:22940526-22940187 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 361-710 |
| Cow position: | chr25:34732612-34732263 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 308, 295 |
| Conread position: | 365-655 |
| Cow position: | chr25:33506748-33507038 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 132 |
| Conread position: | 368-655 |
| Cow position: | chr25:22941374-22941087 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 368-709 |
| Cow position: | chr25:3636559-3636218 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-626 |
| Cow position: | chr25:34762835-34763090 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-655 |
| Cow position: | chr25:3637082-3636800 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 427-657 |
| Cow position: | chr25:36844642-36844412 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-655 |
| Cow position: | chr25:4657463-4657259 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 451-655 |
| Cow position: | chr25:34473509-34473713 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 463-694 |
| Cow position: | chr25:24385402-24385171 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 207, 202 |
| Conread position: | 511-681 |
| Cow position: | chr25:25652166-25652336 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 152, 159 |
Show alignments to all cow chromosomes.