Cow genome map


           Conread name:
           Ss1.1-rece21c_c9.5
        

               Conread position:
               2-183
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               2-787
               

               Cow position:
               
               

               Alignm length:
               801
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 43
               

               Conread position:
               5-535
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 335
               

               Conread position:
               6-655
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 156
               

               Conread position:
               7-190
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               153, 162
               

               Conread position:
               7-371
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 165
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 182
               

               Conread position:
               7-560
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 162
               

               Conread position:
               8-285
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               91, 97
               

               Conread position:
               8-373
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 96
               

               Conread position:
               8-644
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 244
               

               Conread position:
               8-646
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               19-373
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               270, 265
               

               Conread position:
               19-574
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 153
               

               Conread position:
               19-695
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 221
               

               Conread position:
               20-168
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-405
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 111
               

               Conread position:
               20-436
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 64
               

               Conread position:
               20-529
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               20-603
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 154
               

               Conread position:
               20-660
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               21-262
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-619
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 222
               

               Conread position:
               22-655
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               23-646
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               384
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               220, 229
               

               Conread position:
               23-694
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               25-441
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 57
               

               Conread position:
               29-386
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               43-570
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               49-285
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               88-672
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               91-521
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               70, 86
               

               Conread position:
               95-369
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               105-336
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               133, 147
               

               Conread position:
               109-717
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 483
               

               Conread position:
               113-445
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               113-572
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               128-654
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               169-404
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               159, 168
               

               Conread position:
               195-524
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               195-619
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 57
               

               Conread position:
               202-403
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               122, 129
               

               Conread position:
               212-532
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               31, 35
               

               Conread position:
               220-446
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               221-370
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               228-715
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               248-695
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               263-530
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               59, 12
               

               Conread position:
               273-532
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               135, 142
               

               Conread position:
               276-610
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               291-694
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               337-575
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               190, 204
               

               Conread position:
               346-610
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               147, 16
               

               Conread position:
               361-598
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               361-610
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               129, 5
               

               Conread position:
               365-665
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 50
               

               Conread position:
               371-515
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 7
               

               Conread position:
               430-694
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               167, 14
               

               Conread position:
               455-646
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               469-717
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.