Cow genome map
| Conread name: | Ss1.1-rece21c_c9.5 |
| Conread position: | 1-594 |
| Cow position: | chr6:49428956-49429545 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 176 |
| Conread position: | 4-655 |
| Cow position: | chr6:49428623-49429274 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 83 |
| Conread position: | 7-626 |
| Cow position: | chr6:49340634-49341253 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 246, 253 |
| Conread position: | 7-874 |
| Cow position: | chr6:49428542-49429414 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 231 |
| Conread position: | 8-465 |
| Cow position: | chr6:49396524-49396983 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 8-573 |
| Cow position: | chr6:49396194-49396753 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 336, 34 |
| Conread position: | 8-582 |
| Cow position: | chr6:49396356-49396930 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 354 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 8-661 |
| Cow position: | chr6:49396272-49396927 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 165 |
| Conread position: | 8-705 |
| Cow position: | chr6:49428795-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 337 |
| Conread position: | 8-873 |
| Cow position: | chr6:49428291-49429161 (view UCSC Genome Browser custom track) |
| Alignm length: | 876 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 123 |
| Conread position: | 14-655 |
| Cow position: | chr6:49340556-49341198 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 383 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 415 |
| Conread position: | 14-655 |
| Cow position: | chr6:49340724-49341366 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 382 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 7, 225 |
| Conread position: | 18-319 |
| Cow position: | chr6:49362328-49362629 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 146, 155 |
| Conread position: | 18-709 |
| Cow position: | chr6:49428469-49429160 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 652, 647 |
| Conread position: | 24-655 |
| Cow position: | chr6:49428222-49428854 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 231 |
| Conread position: | 53-655 |
| Cow position: | chr6:49396155-49396751 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 365 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 353, 76 |
| Conread position: | 70-655 |
| Cow position: | chr6:49340361-49340946 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 110-656 |
| Cow position: | chr6:49362096-49362630 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 329 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 267-655 |
| Cow position: | chr6:49428214-49428602 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-694 |
| Cow position: | chr6:49428233-49428557 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 58 |
Show alignments to all cow chromosomes.