Cow genome map


           Conread name:
           Ss1.1-rfbs3927b_n2.5
        

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               210-388
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               632-966
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               20, 262
               

               Conread position:
               642-804
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               645-952
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 58
               

               Conread position:
               647-963
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               651-855
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               654-972
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               655-965
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               656-968
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               657-943
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               657-947
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               658-838
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               658-896
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               199, 17
               

               Conread position:
               658-919
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               658-947
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               146, 41
               

               Conread position:
               658-949
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               658-967
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               658-968
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               658-972
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               659-900
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               659-942
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               659-942
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               659-942
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               133, 36
               

               Conread position:
               659-953
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               659-963
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               660-933
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               660-952
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               660-967
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               661-945
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               661-972
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 84
               

               Conread position:
               661-972
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               662-785
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               663-970
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               664-952
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               667-899
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               667-957
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               667-966
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               669-889
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               669-925
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               182, 85
               

               Conread position:
               673-953
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               674-952
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               688-970
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               169, 11
               

               Conread position:
               702-972
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 145
               

               Conread position:
               705-869
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               709-967
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               715-942
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               724-917
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               739-921
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               739-972
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               778-972
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               797-972
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               798-951
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               815-964
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               821-956
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               823-970
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 130
               

               Conread position:
               833-971
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               833-972
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.