Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 642-971 |
| Cow position: | chr12:6644022-6643689 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 645-938 |
| Cow position: | chr12:25357015-25357309 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 134 |
| Conread position: | 651-873 |
| Cow position: | chr12:21052052-21052281 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 173 |
| Conread position: | 652-954 |
| Cow position: | chr12:21081189-21081505 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 146 |
| Conread position: | 655-912 |
| Cow position: | chr12:22448516-22448780 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 658-899 |
| Cow position: | chr12:26554214-26553969 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 132, 77 |
| Conread position: | 658-925 |
| Cow position: | chr12:29630418-29630147 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 658-971 |
| Cow position: | chr12:37359098-37358789 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 660-810 |
| Cow position: | chr12:28580641-28580490 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 662-968 |
| Cow position: | chr12:35305361-35305058 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 667-885 |
| Cow position: | chr12:25550016-25549793 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 667-954 |
| Cow position: | chr12:35231649-35231942 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 667-972 |
| Cow position: | chr12:3896358-3896666 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 752-972 |
| Cow position: | chr12:38819308-38819089 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 763-970 |
| Cow position: | chr12:25493710-25493917 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 786-964 |
| Cow position: | chr12:36200449-36200270 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 787-972 |
| Cow position: | chr12:5111285-5111099 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 804-968 |
| Cow position: | chr12:3049886-3050047 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 819-964 |
| Cow position: | chr12:5167293-5167147 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 41, 138 |
Show alignments to all cow chromosomes.