Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 647-972 |
| Cow position: | chr18:51397558-51397886 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 659-972 |
| Cow position: | chr18:10107899-10107588 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 659-972 |
| Cow position: | chr18:26846661-26846335 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 660-811 |
| Cow position: | chr18:30900048-30900200 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 660-972 |
| Cow position: | chr18:54084173-54084488 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 662-871 |
| Cow position: | chr18:34615258-34615465 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 663-972 |
| Cow position: | chr18:23743376-23743069 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 667-953 |
| Cow position: | chr18:39495088-39494790 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 674-972 |
| Cow position: | chr18:42248315-42248619 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 683-943 |
| Cow position: | chr18:55652806-55652546 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 174, 56 |
| Conread position: | 684-956 |
| Cow position: | chr18:27522690-27522957 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 691-972 |
| Cow position: | chr18:43896082-43896354 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 702-972 |
| Cow position: | chr18:2698164-2697898 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 77 |
| Conread position: | 703-964 |
| Cow position: | chr18:46719625-46719361 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 105, 147 |
| Conread position: | 784-972 |
| Cow position: | chr18:10118831-10118641 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 819-941 |
| Cow position: | chr18:224608-224730 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 829-966 |
| Cow position: | chr18:46728276-46728139 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 122 |
Show alignments to all cow chromosomes.