Cow genome map


           Conread name:
           Ss1.1-rfbs3927b_n2.5
        

               Conread position:
               648-972
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               648-972
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               653-949
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               656-968
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               657-942
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               657-942
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               658-903
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               658-916
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               658-922
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               110, 87
               

               Conread position:
               658-948
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               658-953
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               50, 37
               

               Conread position:
               658-956
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               658-964
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 61
               

               Conread position:
               658-972
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               199, 33
               

               Conread position:
               658-972
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               659-880
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               659-937
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               659-942
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               659-964
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               660-918
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               161, 42
               

               Conread position:
               660-972
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 206
               

               Conread position:
               661-916
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               32, 147
               

               Conread position:
               661-972
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               662-950
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 121
               

               Conread position:
               664-829
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               664-922
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 118
               

               Conread position:
               665-972
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               666-963
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               667-964
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               667-971
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               667-971
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               667-972
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               668-937
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               673-972
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 22
               

               Conread position:
               682-968
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 21
               

               Conread position:
               797-972
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 22
               
Show alignments to all cow chromosomes.