Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 648-972 |
| Cow position: | chr2:17827999-17827687 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 648-972 |
| Cow position: | chr2:23128545-23128856 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 653-949 |
| Cow position: | chr2:22132092-22132386 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 656-968 |
| Cow position: | chr2:37448684-37449013 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 657-942 |
| Cow position: | chr2:52625747-52625461 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 657-942 |
| Cow position: | chr2:61078736-61078459 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 658-903 |
| Cow position: | chr2:62221817-62222065 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 658-916 |
| Cow position: | chr2:13853355-13853099 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 658-922 |
| Cow position: | chr2:26440878-26441145 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 658-948 |
| Cow position: | chr2:30186525-30186833 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 658-953 |
| Cow position: | chr2:10981474-10981756 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 658-956 |
| Cow position: | chr2:31452060-31451752 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 658-964 |
| Cow position: | chr2:53176735-53176430 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 658-972 |
| Cow position: | chr2:42169630-42169940 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 199, 33 |
| Conread position: | 658-972 |
| Cow position: | chr2:54796910-54797228 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 659-880 |
| Cow position: | chr2:61909352-61909579 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 659-937 |
| Cow position: | chr2:3627898-3628177 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 659-942 |
| Cow position: | chr2:8206040-8205756 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 659-964 |
| Cow position: | chr2:51809033-51809344 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 660-918 |
| Cow position: | chr2:4694129-4693867 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 161, 42 |
| Conread position: | 660-972 |
| Cow position: | chr2:66266201-66266525 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 206 |
| Conread position: | 661-916 |
| Cow position: | chr2:80441757-80441504 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 147 |
| Conread position: | 661-972 |
| Cow position: | chr2:4672119-4672415 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 104, 50 |
| Conread position: | 662-950 |
| Cow position: | chr2:8251713-8252011 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 664-829 |
| Cow position: | chr2:71531916-71532082 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 664-922 |
| Cow position: | chr2:85472444-85472184 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 665-972 |
| Cow position: | chr2:4247046-4246736 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 666-963 |
| Cow position: | chr2:9412552-9412255 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 667-964 |
| Cow position: | chr2:80806139-80806430 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 667-971 |
| Cow position: | chr2:30925466-30925183 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 667-971 |
| Cow position: | chr2:66306839-66307151 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 667-972 |
| Cow position: | chr2:66155737-66155416 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 668-937 |
| Cow position: | chr2:19954878-19954598 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 673-972 |
| Cow position: | chr2:33341395-33341696 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 682-968 |
| Cow position: | chr2:22618939-22618645 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 797-972 |
| Cow position: | chr2:35464495-35464322 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 22 |
Show alignments to all cow chromosomes.