Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 627-934 |
| Cow position: | chr20:42034760-42035072 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 658-802 |
| Cow position: | chr20:24648564-24648708 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-861 |
| Cow position: | chr20:26458885-26459092 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 659-930 |
| Cow position: | chr20:19304213-19304489 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 659-970 |
| Cow position: | chr20:41958062-41957767 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 203, 44 |
| Conread position: | 660-922 |
| Cow position: | chr20:36937440-36937712 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 660-945 |
| Cow position: | chr20:22694708-22694993 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 661-912 |
| Cow position: | chr20:28798817-28798567 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 661-919 |
| Cow position: | chr20:35171847-35172106 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 662-971 |
| Cow position: | chr20:21831057-21831367 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 664-968 |
| Cow position: | chr20:16956513-16956834 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 90 |
| Conread position: | 667-972 |
| Cow position: | chr20:6446700-6447010 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 667-972 |
| Cow position: | chr20:28021413-28021102 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 253 |
| Conread position: | 673-964 |
| Cow position: | chr20:21260455-21260757 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 674-945 |
| Cow position: | chr20:16788732-16788451 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 683-961 |
| Cow position: | chr20:25584549-25584820 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 692-888 |
| Cow position: | chr20:7272592-7272396 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 78 |
| Conread position: | 716-972 |
| Cow position: | chr20:39042992-39043237 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 740-949 |
| Cow position: | chr20:767925-768143 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 749-966 |
| Cow position: | chr20:21153056-21153268 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 774-970 |
| Cow position: | chr20:27313856-27314054 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 793-968 |
| Cow position: | chr20:22651664-22651488 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 864-971 |
| Cow position: | chr20:1745618-1745509 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 867-958 |
| Cow position: | chr20:26459415-26459505 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.