Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 651-964 |
| Cow position: | chr21:30191829-30192132 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 657-882 |
| Cow position: | chr21:8718986-8719217 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 657-972 |
| Cow position: | chr21:12576308-12575993 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 196 |
| Conread position: | 658-972 |
| Cow position: | chr21:41728524-41728855 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 659-899 |
| Cow position: | chr21:31765975-31765725 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 659-971 |
| Cow position: | chr21:30203225-30202904 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 108, 216 |
| Conread position: | 660-912 |
| Cow position: | chr21:39884363-39884101 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 660-957 |
| Cow position: | chr21:35028727-35029035 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 666-919 |
| Cow position: | chr21:11444741-11444486 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 666-953 |
| Cow position: | chr21:28731246-28730935 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 667-952 |
| Cow position: | chr21:41458113-41458408 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 667-971 |
| Cow position: | chr21:18047773-18048075 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 668-954 |
| Cow position: | chr21:5878604-5878898 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 670-954 |
| Cow position: | chr21:40526461-40526754 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 706-972 |
| Cow position: | chr21:5467800-5467537 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 719-961 |
| Cow position: | chr21:21225626-21225388 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 141, 100 |
| Conread position: | 739-966 |
| Cow position: | chr21:16898634-16898863 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 745-964 |
| Cow position: | chr21:34895442-34895233 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 764-972 |
| Cow position: | chr21:12560203-12560410 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 802-970 |
| Cow position: | chr21:42392177-42392010 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 858-966 |
| Cow position: | chr21:24417966-24417859 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.