Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 651-954 |
| Cow position: | chr22:45278310-45278608 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 107 |
| Conread position: | 657-971 |
| Cow position: | chr22:9616204-9615878 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 658-972 |
| Cow position: | chr22:20911990-20912305 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 658-972 |
| Cow position: | chr22:29822389-29822088 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 659-949 |
| Cow position: | chr22:21203865-21204162 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 660-951 |
| Cow position: | chr22:7111401-7111092 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 660-953 |
| Cow position: | chr22:44797857-44798154 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 661-965 |
| Cow position: | chr22:22046209-22045903 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 662-967 |
| Cow position: | chr22:3333286-3332972 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 664-879 |
| Cow position: | chr22:44414781-44414988 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 665-966 |
| Cow position: | chr22:31418175-31417857 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 668-969 |
| Cow position: | chr22:30200679-30200984 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 673-942 |
| Cow position: | chr22:13998020-13997750 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 675-956 |
| Cow position: | chr22:40388036-40387755 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 702-931 |
| Cow position: | chr22:14027777-14028003 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 51 |
| Conread position: | 702-963 |
| Cow position: | chr22:40134696-40134953 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 705-936 |
| Cow position: | chr22:6013921-6014156 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 753-971 |
| Cow position: | chr22:15646128-15645905 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 190 |
| Conread position: | 761-972 |
| Cow position: | chr22:8594904-8594692 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 763-957 |
| Cow position: | chr22:29447357-29447555 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 797-953 |
| Cow position: | chr22:17892135-17892290 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 806-970 |
| Cow position: | chr22:305103-304936 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 858-963 |
| Cow position: | chr22:29648006-29647901 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.