Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 651-857 |
| Cow position: | chr24:44588155-44587942 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 191 |
| Conread position: | 651-913 |
| Cow position: | chr24:18416492-18416763 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 658-878 |
| Cow position: | chr24:122142-122365 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 658-968 |
| Cow position: | chr24:18793700-18793388 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 95 |
| Conread position: | 660-807 |
| Cow position: | chr24:25503911-25503764 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 660-962 |
| Cow position: | chr24:19614889-19614595 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 660-964 |
| Cow position: | chr24:3845508-3845205 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 660-972 |
| Cow position: | chr24:5944593-5944891 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 75 |
| Conread position: | 660-972 |
| Cow position: | chr24:33579684-33579384 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 201, 60 |
| Conread position: | 664-967 |
| Cow position: | chr24:29041095-29040793 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 665-971 |
| Cow position: | chr24:26574794-26574478 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 667-964 |
| Cow position: | chr24:36715763-36715470 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 667-972 |
| Cow position: | chr24:3674514-3674215 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 668-967 |
| Cow position: | chr24:14514484-14514778 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 668-968 |
| Cow position: | chr24:31421084-31420785 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 248 |
| Conread position: | 705-964 |
| Cow position: | chr24:32850860-32850597 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 139 |
| Conread position: | 726-971 |
| Cow position: | chr24:33526170-33526420 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 732-972 |
| Cow position: | chr24:9775770-9776006 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 798-951 |
| Cow position: | chr24:35653500-35653349 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 819-971 |
| Cow position: | chr24:10761028-10760878 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 834-972 |
| Cow position: | chr24:35658412-35658550 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 81 |
Show alignments to all cow chromosomes.