Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 632-900 |
| Cow position: | chr25:12494552-12494819 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 634-972 |
| Cow position: | chr25:11962441-11962097 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 649-907 |
| Cow position: | chr25:16858553-16858813 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 653-964 |
| Cow position: | chr25:11849443-11849759 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 654-972 |
| Cow position: | chr25:29309494-29309172 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 251 |
| Conread position: | 655-922 |
| Cow position: | chr25:36632467-36632720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 657-942 |
| Cow position: | chr25:11526441-11526726 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 658-964 |
| Cow position: | chr25:31515819-31515508 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 285 |
| Conread position: | 658-967 |
| Cow position: | chr25:31676979-31676674 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 175, 38 |
| Conread position: | 658-972 |
| Cow position: | chr25:17418123-17418428 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 661-913 |
| Cow position: | chr25:4078731-4078482 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 661-971 |
| Cow position: | chr25:21960760-21961072 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 668-971 |
| Cow position: | chr25:35560048-35560356 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 670-909 |
| Cow position: | chr25:41052234-41051991 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 692-972 |
| Cow position: | chr25:16578160-16578441 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 113, 134 |
| Conread position: | 707-895 |
| Cow position: | chr25:20249474-20249278 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 726-971 |
| Cow position: | chr25:14959517-14959765 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 811-965 |
| Cow position: | chr25:41104112-41104264 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 10 |
Show alignments to all cow chromosomes.