Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 657-936 |
| Cow position: | chr26:14166086-14165809 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 657-954 |
| Cow position: | chr26:11793636-11793338 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 657-964 |
| Cow position: | chr26:7330006-7329711 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 658-966 |
| Cow position: | chr26:13008604-13008922 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 659-957 |
| Cow position: | chr26:16885010-16884711 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 659-972 |
| Cow position: | chr26:9822815-9823124 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 660-942 |
| Cow position: | chr26:14936942-14937227 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 660-966 |
| Cow position: | chr26:26665481-26665789 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 663-961 |
| Cow position: | chr26:29315322-29315017 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 665-874 |
| Cow position: | chr26:13026972-13027182 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 666-952 |
| Cow position: | chr26:19101965-19101682 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 150 |
| Conread position: | 666-964 |
| Cow position: | chr26:7171710-7172009 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 667-942 |
| Cow position: | chr26:4260686-4260961 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 668-971 |
| Cow position: | chr26:2724827-2725114 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 100, 5 |
| Conread position: | 677-938 |
| Cow position: | chr26:11304398-11304137 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 688-965 |
| Cow position: | chr26:27702111-27701833 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 66 |
| Conread position: | 691-954 |
| Cow position: | chr26:15894023-15893769 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 111, 41 |
| Conread position: | 691-967 |
| Cow position: | chr26:15514796-15515064 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 693-919 |
| Cow position: | chr26:2462505-2462280 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 704-972 |
| Cow position: | chr26:11331461-11331196 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 705-971 |
| Cow position: | chr26:16511048-16510778 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 724-972 |
| Cow position: | chr26:14454944-14455193 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 732-972 |
| Cow position: | chr26:26158498-26158259 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 737-970 |
| Cow position: | chr26:3869139-3869365 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 739-972 |
| Cow position: | chr26:428779-429017 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 762-939 |
| Cow position: | chr26:21466460-21466647 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 767-972 |
| Cow position: | chr26:14428984-14429194 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 774-954 |
| Cow position: | chr26:3526985-3526798 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.