Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 645-790 |
| Cow position: | chr28:15971894-15972039 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 645-962 |
| Cow position: | chr28:28600657-28600330 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 646-947 |
| Cow position: | chr28:30390276-30390582 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 648-823 |
| Cow position: | chr28:19216794-19216614 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 651-966 |
| Cow position: | chr28:7656668-7656354 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 658-971 |
| Cow position: | chr28:11543194-11543504 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 131 |
| Conread position: | 658-972 |
| Cow position: | chr28:14651887-14651570 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 659-962 |
| Cow position: | chr28:25307245-25306943 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 43 |
| Conread position: | 661-971 |
| Cow position: | chr28:15372692-15372398 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 132, 40 |
| Conread position: | 664-899 |
| Cow position: | chr28:15516833-15517060 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 667-968 |
| Cow position: | chr28:20037010-20036703 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 150, 28 |
| Conread position: | 679-901 |
| Cow position: | chr28:15724963-15725190 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 704-971 |
| Cow position: | chr28:23112163-23111886 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 706-936 |
| Cow position: | chr28:24330236-24330467 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 715-971 |
| Cow position: | chr28:22440435-22440173 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 139 |
| Conread position: | 732-970 |
| Cow position: | chr28:21366674-21366919 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 785-972 |
| Cow position: | chr28:13719647-13719461 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 834-967 |
| Cow position: | chr28:16700134-16700000 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.