Cow genome map
| Conread name: | Ss1.1-rfbs3927b_n2.5 |
| Conread position: | 645-971 |
| Cow position: | chr7:29623144-29622826 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 128, 180 |
| Conread position: | 652-916 |
| Cow position: | chr7:37743520-37743791 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 17, 74 |
| Conread position: | 658-877 |
| Cow position: | chr7:65371174-65370946 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 140 |
| Conread position: | 658-948 |
| Cow position: | chr7:57536288-57536006 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 658-972 |
| Cow position: | chr7:9585719-9586032 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 659-871 |
| Cow position: | chr7:97403-97632 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 659-971 |
| Cow position: | chr7:11442281-11441977 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 660-954 |
| Cow position: | chr7:35302894-35302609 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 660-972 |
| Cow position: | chr7:58996021-58995699 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 661-945 |
| Cow position: | chr7:35181515-35181236 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 662-917 |
| Cow position: | chr7:10762866-10762603 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 662-965 |
| Cow position: | chr7:49893067-49893369 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 667-972 |
| Cow position: | chr7:26180473-26180782 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 668-855 |
| Cow position: | chr7:47069838-47070021 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 681-972 |
| Cow position: | chr7:12336516-12336809 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 686-963 |
| Cow position: | chr7:1667064-1666787 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 694-972 |
| Cow position: | chr7:18667768-18667486 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 148 |
| Conread position: | 705-967 |
| Cow position: | chr7:12406955-12406696 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 721-954 |
| Cow position: | chr7:40632796-40632569 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 724-954 |
| Cow position: | chr7:48751360-48751595 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 810-964 |
| Cow position: | chr7:19604126-19604279 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 823-972 |
| Cow position: | chr7:39599980-39600132 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 825-950 |
| Cow position: | chr7:62067252-62067119 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.