Cow genome map


           Conread name:
           Ss1.1-rfcc04b_m13.5
        

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               1-277
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               94, 98
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               78, 72
               

               Conread position:
               2-166
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-250
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-278
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 97
               

               Conread position:
               2-280
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-298
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               2-299
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 261
               

               Conread position:
               4-231
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 7
               

               Conread position:
               4-253
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 197
               

               Conread position:
               4-268
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 93
               

               Conread position:
               6-268
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-323
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 264
               

               Conread position:
               7-206
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-249
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-280
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               78, 92
               

               Conread position:
               7-280
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               263, 268
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               88, 92
               

               Conread position:
               7-311
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               81, 77
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               287, 0
               

               Conread position:
               8-289
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 91
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 95
               

               Conread position:
               9-278
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               243, 247
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-194
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-299
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               11-250
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               96, 91
               

               Conread position:
               11-280
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 260
               

               Conread position:
               11-289
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               12-194
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-254
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               171, 167
               

               Conread position:
               12-278
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               12-280
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-221
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               82, 87
               

               Conread position:
               13-268
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-249
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               14-256
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               14-278
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-289
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               250, 7
               

               Conread position:
               16-289
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               199, 211
               

               Conread position:
               20-206
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-240
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               164, 171
               

               Conread position:
               21-277
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               235, 23
               

               Conread position:
               22-250
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 77
               

               Conread position:
               22-276
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-278
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-281
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-289
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-210
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-248
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               23-250
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               144, 138
               

               Conread position:
               23-276
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               23-280
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               23-280
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               160, 156
               

               Conread position:
               23-280
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               229, 233
               

               Conread position:
               23-289
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               23-289
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               23-290
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               35-281
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               35-281
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               35-281
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-281
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               39-280
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               39-280
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-280
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               58-321
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               67-278
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-289
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-298
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-298
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.