Cow genome map
| Conread name: | Ss1.1-rfcc04b_m13.5 |
| Conread position: | 3-289 |
| Cow position: | chr6:49428607-49428893 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 7-289 |
| Cow position: | chr6:49428275-49428557 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 88, 100 |
| Conread position: | 7-289 |
| Cow position: | chr6:49428359-49428641 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 108, 96 |
| Conread position: | 7-289 |
| Cow position: | chr6:49429031-49429313 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 88, 101 |
| Conread position: | 7-289 |
| Cow position: | chr6:49429115-49429397 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 8-298 |
| Cow position: | chr6:49428528-49428818 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 12-298 |
| Cow position: | chr6:49428700-49428986 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 19-281 |
| Cow position: | chr6:49428791-49429053 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 20-267 |
| Cow position: | chr6:49428960-49429207 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-268 |
| Cow position: | chr6:49429298-49429540 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 22-281 |
| Cow position: | chr6:49428878-49429137 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 77 |
| Conread position: | 26-253 |
| Cow position: | chr6:49428461-49428689 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 30-268 |
| Cow position: | chr6:49428214-49428452 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-289 |
| Cow position: | chr6:49429227-49429481 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 68, 72 |
Show alignments to all cow chromosomes.