Cow genome map
| Conread name: | Ss1.1-rfce12c_l6.5.5 |
| Conread position: | 1-155 |
| Cow position: | chr7:35016937-35016781 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 214-304 |
| Cow position: | chr7:35015129-35015039 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-483 |
| Cow position: | chr7:35014061-35013878 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 481-608 |
| Cow position: | chr7:35013137-35013010 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 120 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 606-683 |
| Cow position: | chr7:35012101-35012024 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 681-789 |
| Cow position: | chr7:35011942-35011834 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 790-952 |
| Cow position: | chr7:35011235-35011073 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 951-1045 |
| Cow position: | chr7:35010093-35009999 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1041-1257 |
| Cow position: | chr7:35006951-35006735 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1254-1485 |
| Cow position: | chr7:35005625-35005394 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1482-1597 |
| Cow position: | chr7:35004531-35004416 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1580-1706 |
| Cow position: | chr7:35003683-35003556 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 121 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1707-1802 |
| Cow position: | chr7:35002898-35002803 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1800-1893 |
| Cow position: | chr7:35002598-35002505 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1893-2035 |
| Cow position: | chr7:35002323-35002181 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2019-2394 |
| Cow position: | chr7:35001922-35001541 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 6 |
| Conread position: | 2387-2760 |
| Cow position: | chr7:35001471-35001106 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 21 |
Show alignments to all cow chromosomes.