Cow genome map
| Conread name: | Ss1.1-rgul0101_i8.5 |
| Conread position: | 1-375 |
| Cow position: | chr10:9010210-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 1-508 |
| Cow position: | chr10:9010378-9009870 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 1-594 |
| Cow position: | chr10:9010546-9009949 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 16-522 |
| Cow position: | chr10:8996886-8996381 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 488, 0 |
| Conread position: | 19-517 |
| Cow position: | chr10:8996547-8996050 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 181 |
| Conread position: | 20-397 |
| Cow position: | chr10:8996378-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-442 |
| Cow position: | chr10:9010274-9009852 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 20-636 |
| Cow position: | chr10:8996630-8996007 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 542 |
| Conread position: | 21-494 |
| Cow position: | chr10:21939113-21938643 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 24-636 |
| Cow position: | chr10:8996710-8996091 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 489, 516 |
| Conread position: | 35-389 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 35-512 |
| Cow position: | chr10:8996783-8996306 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-422 |
| Cow position: | chr10:9031231-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-508 |
| Cow position: | chr10:21939174-21938713 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 98-600 |
| Cow position: | chr10:8996888-8996382 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 119-512 |
| Cow position: | chr10:9010511-9010118 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 124-560 |
| Cow position: | chr10:9031231-9031667 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 138-512 |
| Cow position: | chr10:21939164-21938790 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 163-593 |
| Cow position: | chr10:21939223-21938789 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 194, 185 |
| Conread position: | 164-555 |
| Cow position: | chr10:9010550-9010156 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 319, 303 |
| Conread position: | 205-507 |
| Cow position: | chr10:9031228-9031529 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 213-597 |
| Cow position: | chr10:9010583-9010197 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 247-525 |
| Cow position: | chr10:21939223-21938946 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 257, 0 |
| Conread position: | 289-573 |
| Cow position: | chr10:9031228-9031514 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 228, 273 |
| Conread position: | 304-594 |
| Cow position: | chr10:8996934-8996641 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 209, 258 |
Show alignments to all cow chromosomes.