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Cow genome map

           
Conread name:
           
Ss1.1-rgul0101_i8.5
        

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:22634923-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:42744098-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:42792507-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:55018499-55018903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr18:52447979-52448410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:40306872-40307304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:55008842-55009274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr18:51812349-51811900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:42984941-42984477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:41198278-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr18:14453989-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr18:56316416-56316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 270
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:33092907-33092418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:33064067-33063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:43168074-43168564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr18:33064990-33064485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr18:51789106-51788602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 270
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:44240124-44240631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:56248044-56247527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:44254024-44253520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:56434160-56434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr18:56433747-56434248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:53560209-53560721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:53636097-53635585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:56128068-56128580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:22634671-22635185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:41949066-41948550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 189
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:43093387-43092872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 182
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:44253285-44252781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:50848534-50849049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:55018247-55018763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:42960268-42959749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53525723-53526243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr18:42985026-42984491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:42791919-42792484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:43167823-43168388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 189
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:50281789-50282357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 194
               

               
Conread position:
               
1-569
               

               
Cow position:
               
chr18:50848786-50849357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr18:50848870-50849444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 320
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:40086737-40086162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:42791247-42791822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:42837821-42837246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 199
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:52427664-52428239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 263
               

               
Conread position:
               
1-589
               

               
Cow position:
               
chr18:40306536-40307127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:43167739-43168336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:50059424-50058827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 562
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:50281705-50282302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 186
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:53509353-53509950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:53587137-53586539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:54967903-54968498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:54979591-54980188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 562
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:54980095-54980691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:54992851-54993448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:54992935-54993532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:55018163-55018761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
1-594
               

               
Cow position:
               
chr18:56433918-56434505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
1-596
               

               
Cow position:
               
chr18:53559873-53560473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 196
               

               
Conread position:
               
1-597
               

               
Cow position:
               
chr18:53525891-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
1-598
               

               
Cow position:
               
chr18:56434328-56434929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chr18:53525807-53526411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
1-601
               

               
Cow position:
               
chr18:52433013-52433618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 347
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr18:54979927-54980536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr18:50271492-50272104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:44240208-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
1-632
               

               
Cow position:
               
chr18:40324853-40324214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 542
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:44184687-44184045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 183
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:44239788-44240430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:42791079-42791722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:42791582-42792226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:43120292-43119649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:50030951-50030311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:50059592-50058949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 199
               

               
Conread position:
               
2-610
               

               
Cow position:
               
chr18:50058835-50058235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr18:1418371-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:1418288-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr18:51812262-51811897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr18:51839191-51838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
96, 86
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr18:50048770-50048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr18:40324346-40323858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 98
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr18:50295390-50295894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 0
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:50295222-50295731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 264
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:51789187-51788679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
253, 260
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr18:53560295-53560804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr18:55008676-55009190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
3-538
               

               
Cow position:
               
chr18:43093301-43092764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
3-556
               

               
Cow position:
               
chr18:50083484-50084040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
3-558
               

               
Cow position:
               
chr18:1418036-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 188
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr18:41197608-41198171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
3-561
               

               
Cow position:
               
chr18:40075141-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
3-571
               

               
Cow position:
               
chr18:51789607-51789037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 191
               

               
Conread position:
               
3-573
               

               
Cow position:
               
chr18:51789775-51789203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 537
               

               
Conread position:
               
3-573
               

               
Cow position:
               
chr18:51813018-51812446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
3-573
               

               
Cow position:
               
chr18:52433184-52433756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
3-594
               

               
Cow position:
               
chr18:51874096-51874684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
3-597
               

               
Cow position:
               
chr18:53498345-53498941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
3-597
               

               
Cow position:
               
chr18:55017997-55018595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
3-600
               

               
Cow position:
               
chr18:53509440-53510040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
3-635
               

               
Cow position:
               
chr18:41197692-41198332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 193
               

               
Conread position:
               
3-635
               

               
Cow position:
               
chr18:51812934-51812295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 453
               

               
Conread position:
               
3-636
               

               
Cow position:
               
chr18:42675204-42674563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 197
               

               
Conread position:
               
3-636
               

               
Cow position:
               
chr18:42675620-42674983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
3-636
               

               
Cow position:
               
chr18:51400313-51400954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 259
               

               
Conread position:
               
3-636
               

               
Cow position:
               
chr18:51812766-51812126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 285
               

               
Conread position:
               
4-636
               

               
Cow position:
               
chr18:50022539-50021894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 116
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr18:51765962-51765534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 261
               

               
Conread position:
               
5-508
               

               
Cow position:
               
chr18:42791000-42791502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 173
               

               
Conread position:
               
5-588
               

               
Cow position:
               
chr18:44154504-44153914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 274
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr18:51874261-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
248, 258
               

               
Conread position:
               
6-433
               

               
Cow position:
               
chr18:43119950-43119523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 104
               

               
Conread position:
               
6-481
               

               
Cow position:
               
chr18:51752214-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
6-571
               

               
Cow position:
               
chr18:51368397-51367830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
6-574
               

               
Cow position:
               
chr18:51752130-51751559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 281
               

               
Conread position:
               
6-594
               

               
Cow position:
               
chr18:42744680-42744089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
6-594
               

               
Cow position:
               
chr18:55008765-55009353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr18:42959682-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-380
               

               
Cow position:
               
chr18:43022361-43021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr18:43048606-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
316, 286
               

               
Conread position:
               
7-432
               

               
Cow position:
               
chr18:42827526-42827956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 0
               

               
Conread position:
               
7-433
               

               
Cow position:
               
chr18:51969629-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr18:42837562-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 88
               

               
Conread position:
               
7-480
               

               
Cow position:
               
chr18:50021858-50021381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
7-486
               

               
Cow position:
               
chr18:42694010-42693531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
7-494
               

               
Cow position:
               
chr18:42693422-42692937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
7-508
               

               
Cow position:
               
chr18:42744343-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 0
               

               
Conread position:
               
7-508
               

               
Cow position:
               
chr18:56247607-56247116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr18:52428511-52429013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 193
               

               
Conread position:
               
7-510
               

               
Cow position:
               
chr18:50048849-50048346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 111
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:50295310-50295815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
174, 191
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:52433692-52434197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 193
               

               
Conread position:
               
7-515
               

               
Cow position:
               
chr18:42693926-42693418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 181
               

               
Conread position:
               
7-515
               

               
Cow position:
               
chr18:44184848-44184340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-517
               

               
Cow position:
               
chr18:51969547-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
351, 55
               

               
Conread position:
               
7-524
               

               
Cow position:
               
chr18:33092984-33092468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 64
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr18:33064396-33063874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
7-569
               

               
Cow position:
               
chr18:50099601-50100165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 89
               

               
Conread position:
               
7-573
               

               
Cow position:
               
chr18:52428007-52428575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 106
               

               
Conread position:
               
7-573
               

               
Cow position:
               
chr18:52428259-52428827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 106
               

               
Conread position:
               
7-594
               

               
Cow position:
               
chr18:50058997-50058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 90
               

               
Conread position:
               
7-635
               

               
Cow position:
               
chr18:42837898-42837263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
7-636
               

               
Cow position:
               
chr18:42792094-42792730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 182
               

               
Conread position:
               
7-636
               

               
Cow position:
               
chr18:51969379-51970004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
331, 235
               

               
Conread position:
               
8-512
               

               
Cow position:
               
chr18:51368311-51367808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:50271584-50272141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
8-571
               

               
Cow position:
               
chr18:51839439-51838873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 555
               

               
Conread position:
               
8-594
               

               
Cow position:
               
chr18:42837729-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
514, 554
               

               
Conread position:
               
8-635
               

               
Cow position:
               
chr18:41197950-41198584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 271
               

               
Conread position:
               
8-635
               

               
Cow position:
               
chr18:41198118-41198752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
9-636
               

               
Cow position:
               
chr18:52447232-52447866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 104
               

               
Conread position:
               
11-483
               

               
Cow position:
               
chr18:50271672-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
11-502
               

               
Cow position:
               
chr18:50083913-50084405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
371, 13
               

               
Conread position:
               
11-635
               

               
Cow position:
               
chr18:50059076-50058448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
13-502
               

               
Cow position:
               
chr18:51789261-51788772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
245, 253
               

               
Conread position:
               
13-573
               

               
Cow position:
               
chr18:42790840-42791402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
13-636
               

               
Cow position:
               
chr18:53559802-53560432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
14-510
               

               
Cow position:
               
chr18:56316179-56316674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
14-571
               

               
Cow position:
               
chr18:42792270-42792828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
500, 13
               

               
Conread position:
               
14-594
               

               
Cow position:
               
chr18:50048926-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
15-501
               

               
Cow position:
               
chr18:56316347-56316833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
15-561
               

               
Cow position:
               
chr18:56316095-56316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 99
               

               
Conread position:
               
15-593
               

               
Cow position:
               
chr18:56433514-56434093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
15-594
               

               
Cow position:
               
chr18:41949134-41948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
16-507
               

               
Cow position:
               
chr18:51367718-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
16-528
               

               
Cow position:
               
chr18:50021933-50021415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 174
               

               
Conread position:
               
16-596
               

               
Cow position:
               
chr18:43167923-43168507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 251
               

               
Conread position:
               
17-401
               

               
Cow position:
               
chr18:44397887-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
263, 254
               

               
Conread position:
               
17-429
               

               
Cow position:
               
chr18:40306721-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
17-484
               

               
Cow position:
               
chr18:56316601-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
17-494
               

               
Cow position:
               
chr18:49032578-49032101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
17-495
               

               
Cow position:
               
chr18:42693664-42693187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
166, 173
               

               
Conread position:
               
17-495
               

               
Cow position:
               
chr18:51839261-51838783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 270
               

               
Conread position:
               
17-507
               

               
Cow position:
               
chr18:56128253-56128742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
17-511
               

               
Cow position:
               
chr18:53610167-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
17-516
               

               
Cow position:
               
chr18:42693832-42693333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
17-527
               

               
Cow position:
               
chr18:50848971-50849484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
17-558
               

               
Cow position:
               
chr18:50022016-50021469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 187
               

               
Conread position:
               
17-561
               

               
Cow position:
               
chr18:42792188-42792735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
17-562
               

               
Cow position:
               
chr18:1417966-1418514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
17-571
               

               
Cow position:
               
chr18:56128505-56129061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 106
               

               
Conread position:
               
17-573
               

               
Cow position:
               
chr18:44398223-44397665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 175
               

               
Conread position:
               
17-573
               

               
Cow position:
               
chr18:51765866-51765308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
237, 271
               

               
Conread position:
               
17-573
               

               
Cow position:
               
chr18:52427512-52428071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
11, 331
               

               
Conread position:
               
17-573
               

               
Cow position:
               
chr18:52432861-52433420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 331
               

               
Conread position:
               
17-585
               

               
Cow position:
               
chr18:42792356-42792929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 478
               

               
Conread position:
               
17-594
               

               
Cow position:
               
chr18:43093622-43093042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
17-594
               

               
Cow position:
               
chr18:49032914-49032334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 103
               

               
Conread position:
               
17-594
               

               
Cow position:
               
chr18:50059239-50058659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 101
               

               
Conread position:
               
17-596
               

               
Cow position:
               
chr18:52447408-52447991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 162
               

               
Conread position:
               
17-596
               

               
Cow position:
               
chr18:53635912-53635329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
270, 266
               

               
Conread position:
               
17-630
               

               
Cow position:
               
chr18:51874027-51874640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
17-635
               

               
Cow position:
               
chr18:51789509-51788884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
17-636
               

               
Cow position:
               
chr18:50059659-50059033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 179
               

               
Conread position:
               
17-636
               

               
Cow position:
               
chr18:52446988-52447614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr18:43174887-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
231, 226
               

               
Conread position:
               
18-442
               

               
Cow position:
               
chr18:42959830-42959415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
18-442
               

               
Cow position:
               
chr18:44253758-44253335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
368, 0
               

               
Conread position:
               
18-448
               

               
Cow position:
               
chr18:41948711-41948283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
186, 182
               

               
Conread position:
               
18-515
               

               
Cow position:
               
chr18:41948879-41948382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
18-527
               

               
Cow position:
               
chr18:49033333-49032826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 0
               

               
Conread position:
               
18-532
               

               
Cow position:
               
chr18:51368554-51368043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 325
               

               
Conread position:
               
18-573
               

               
Cow position:
               
chr18:41949383-41948826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 180
               

               
Conread position:
               
18-629
               

               
Cow position:
               
chr18:43120190-43119572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
18-635
               

               
Cow position:
               
chr18:43022686-43022062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
19-398
               

               
Cow position:
               
chr18:44184332-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
19-493
               

               
Cow position:
               
chr18:51400582-51401056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 175
               

               
Conread position:
               
19-509
               

               
Cow position:
               
chr18:42693746-42693256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
19-512
               

               
Cow position:
               
chr18:33093056-33092563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 248
               

               
Conread position:
               
19-512
               

               
Cow position:
               
chr18:49033080-49032587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 252
               

               
Conread position:
               
19-512
               

               
Cow position:
               
chr18:56329717-56329224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 101
               

               
Conread position:
               
19-515
               

               
Cow position:
               
chr18:44253841-44253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 0
               

               
Conread position:
               
19-515
               

               
Cow position:
               
chr18:52433368-52433864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 184
               

               
Conread position:
               
19-521
               

               
Cow position:
               
chr18:51367797-51367295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
19-573
               

               
Cow position:
               
chr18:51400498-51401054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 167
               

               
Conread position:
               
19-573
               

               
Cow position:
               
chr18:52427935-52428491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
19-573
               

               
Cow position:
               
chr18:52428187-52428743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 184
               

               
Conread position:
               
19-589
               

               
Cow position:
               
chr18:52428439-52429011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
19-589
               

               
Cow position:
               
chr18:52433620-52434192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 181
               

               
Conread position:
               
19-597
               

               
Cow position:
               
chr18:40324582-40324000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
19-598
               

               
Cow position:
               
chr18:52427767-52428350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
19-635
               

               
Cow position:
               
chr18:40086380-40085767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
185, 174
               

               
Conread position:
               
19-635
               

               
Cow position:
               
chr18:43175222-43174599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 328
               

               
Conread position:
               
19-635
               

               
Cow position:
               
chr18:44184920-44184297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
503, 533
               

               
Conread position:
               
19-636
               

               
Cow position:
               
chr18:52446833-52447446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
254, 70
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr18:49032323-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
244, 253
               

               
Conread position:
               
20-303
               

               
Cow position:
               
chr18:49023033-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr18:56247350-56247059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
184, 163
               

               
Conread position:
               
20-334
               

               
Cow position:
               
chr18:51751780-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 75
               

               
Conread position:
               
20-464
               

               
Cow position:
               
chr18:56329296-56328852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
20-477
               

               
Cow position:
               
chr18:43048677-43048222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
392, 357
               

               
Conread position:
               
20-485
               

               
Cow position:
               
chr18:1418137-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 169
               

               
Conread position:
               
20-493
               

               
Cow position:
               
chr18:43174969-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 308
               

               
Conread position:
               
20-494
               

               
Cow position:
               
chr18:44154148-44153681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
20-504
               

               
Cow position:
               
chr18:44184415-44183930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
252, 262
               

               
Conread position:
               
20-507
               

               
Cow position:
               
chr18:41948961-41948475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
20-507
               

               
Cow position:
               
chr18:51839342-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
20-508
               

               
Cow position:
               
chr18:40306388-40306876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 163
               

               
Conread position:
               
20-508
               

               
Cow position:
               
chr18:49033163-49032676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 154
               

               
Conread position:
               
20-510
               

               
Cow position:
               
chr18:44398052-44397562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
20-510
               

               
Cow position:
               
chr18:56316520-56317010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-511
               

               
Cow position:
               
chr18:56128676-56129166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
20-512
               

               
Cow position:
               
chr18:44253504-44253026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
244, 131
               

               
Conread position:
               
20-512
               

               
Cow position:
               
chr18:53635657-53635165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
20-512
               

               
Cow position:
               
chr18:56329464-56328972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-515
               

               
Cow position:
               
chr18:41948793-41948300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 253
               

               
Conread position:
               
20-515
               

               
Cow position:
               
chr18:42674850-42674359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
20-515
               

               
Cow position:
               
chr18:42792023-42792518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-515
               

               
Cow position:
               
chr18:42959912-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
20-515
               

               
Cow position:
               
chr18:49032659-49032164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 180
               

               
Conread position:
               
20-539
               

               
Cow position:
               
chr18:51812413-51811893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 243
               

               
Conread position:
               
20-562
               

               
Cow position:
               
chr18:40324497-40323952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 180
               

               
Conread position:
               
20-573
               

               
Cow position:
               
chr18:42744498-42743943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
494, 538
               

               
Conread position:
               
20-573
               

               
Cow position:
               
chr18:51752369-51751813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
20-589
               

               
Cow position:
               
chr18:42744414-42743843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
20-597
               

               
Cow position:
               
chr18:53635489-53634910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
20-606
               

               
Cow position:
               
chr18:54993291-54993880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 268
               

               
Conread position:
               
20-635
               

               
Cow position:
               
chr18:41949297-41948675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 540
               

               
Conread position:
               
20-635
               

               
Cow position:
               
chr18:43175557-43174935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 414
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:40324665-40324042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:44398388-44397765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 178
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:51368047-51367425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:51839510-51838887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 246
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:51969074-51969677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
338, 154
               

               
Conread position:
               
20-636
               

               
Cow position:
               
chr18:52447075-52447698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 259
               

               
Conread position:
               
21-485
               

               
Cow position:
               
chr18:44397967-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 177
               

               
Conread position:
               
21-512
               

               
Cow position:
               
chr18:56329379-56328888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 162
               

               
Conread position:
               
21-515
               

               
Cow position:
               
chr18:43022851-43022357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
21-515
               

               
Cow position:
               
chr18:43022935-43022441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
21-544
               

               
Cow position:
               
chr18:50022267-50021738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 169
               

               
Conread position:
               
21-562
               

               
Cow position:
               
chr18:42744746-42744205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
21-631
               

               
Cow position:
               
chr18:42675017-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
21-635
               

               
Cow position:
               
chr18:42985172-42984551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
22-507
               

               
Cow position:
               
chr18:54967088-54967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
22-561
               

               
Cow position:
               
chr18:43093533-43092991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 335
               

               
Conread position:
               
23-517
               

               
Cow position:
               
chr18:44398133-44397640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
23-569
               

               
Cow position:
               
chr18:50049001-50048453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
23-594
               

               
Cow position:
               
chr18:50246215-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 172
               

               
Conread position:
               
24-441
               

               
Cow position:
               
chr18:55066803-55066386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
24-501
               

               
Cow position:
               
chr18:53586356-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 90
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr18:42724449-42723966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
24-507
               

               
Cow position:
               
chr18:53587028-53586545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
24-512
               

               
Cow position:
               
chr18:49032739-49032251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 323
               

               
Conread position:
               
24-515
               

               
Cow position:
               
chr18:51874195-51874686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
24-515
               

               
Cow position:
               
chr18:55066887-55066396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
24-515
               

               
Cow position:
               
chr18:56247674-56247191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
24-518
               

               
Cow position:
               
chr18:56128848-56129340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
318, 285
               

               
Conread position:
               
24-561
               

               
Cow position:
               
chr18:49022617-49023157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
157, 171
               

               
Conread position:
               
24-594
               

               
Cow position:
               
chr18:50848726-50849299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 47
               

               
Conread position:
               
24-597
               

               
Cow position:
               
chr18:49032991-49032414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 85
               

               
Conread position:
               
24-631
               

               
Cow position:
               
chr18:43093447-43092833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 244
               

               
Conread position:
               
24-634
               

               
Cow position:
               
chr18:41197546-41198163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
489, 528
               

               
Conread position:
               
24-635
               

               
Cow position:
               
chr18:51789670-51789052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
24-636
               

               
Cow position:
               
chr18:43093939-43093332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
493, 216
               

               
Conread position:
               
25-508
               

               
Cow position:
               
chr18:56329543-56329061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 175
               

               
Conread position:
               
25-562
               

               
Cow position:
               
chr18:40306225-40306765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
494, 479
               

               
Conread position:
               
26-379
               

               
Cow position:
               
chr18:42744156-42743803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
26-428
               

               
Cow position:
               
chr18:50271770-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 0
               

               
Conread position:
               
26-429
               

               
Cow position:
               
chr18:50083843-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
26-431
               

               
Cow position:
               
chr18:50246470-50246872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
26-494
               

               
Cow position:
               
chr18:52447837-52448306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 242
               

               
Conread position:
               
26-502
               

               
Cow position:
               
chr18:51400673-51401149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
26-503
               

               
Cow position:
               
chr18:55523869-55524347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
26-507
               

               
Cow position:
               
chr18:43120014-43119533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
26-507
               

               
Cow position:
               
chr18:52447921-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
26-509
               

               
Cow position:
               
chr18:50250894-50251370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
26-511
               

               
Cow position:
               
chr18:56494069-56494551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
26-512
               

               
Cow position:
               
chr18:33064713-33064227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
26-512
               

               
Cow position:
               
chr18:50246302-50246788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
26-536
               

               
Cow position:
               
chr18:43022510-43022002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 237
               

               
Conread position:
               
26-545
               

               
Cow position:
               
chr18:44240066-44240581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
26-558
               

               
Cow position:
               
chr18:44184493-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 237
               

               
Conread position:
               
26-560
               

               
Cow position:
               
chr18:55523785-55524322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
26-561
               

               
Cow position:
               
chr18:56330046-56329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
26-562
               

               
Cow position:
               
chr18:42791777-42792316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 0
               

               
Conread position:
               
26-573
               

               
Cow position:
               
chr18:40075080-40075629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
26-573
               

               
Cow position:
               
chr18:42985503-42984954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 174
               

               
Conread position:
               
26-573
               

               
Cow position:
               
chr18:43175047-43174498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 162
               

               
Conread position:
               
26-573
               

               
Cow position:
               
chr18:50099368-50099917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
26-573
               

               
Cow position:
               
chr18:52428110-52428659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 173
               

               
Conread position:
               
26-589
               

               
Cow position:
               
chr18:52428362-52428928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 173
               

               
Conread position:
               
26-589
               

               
Cow position:
               
chr18:52433543-52434109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 173
               

               
Conread position:
               
26-594
               

               
Cow position:
               
chr18:41197884-41198455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 243
               

               
Conread position:
               
26-594
               

               
Cow position:
               
chr18:43023014-43022443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 536
               

               
Conread position:
               
26-594
               

               
Cow position:
               
chr18:50246134-50246705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
26-597
               

               
Cow position:
               
chr18:56247756-56247189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 237
               

               
Conread position:
               
26-636
               

               
Cow position:
               
chr18:50083591-50084208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
26-636
               

               
Cow position:
               
chr18:52447333-52447950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 536
               

               
Conread position:
               
26-636
               

               
Cow position:
               
chr18:52447585-52448202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
490, 510
               

               
Conread position:
               
26-636
               

               
Cow position:
               
chr18:52447669-52448286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 242
               

               
Conread position:
               
27-512
               

               
Cow position:
               
chr18:43175298-43174813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 255
               

               
Conread position:
               
27-573
               

               
Cow position:
               
chr18:51765520-51764972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
27-597
               

               
Cow position:
               
chr18:55008451-55009023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
27-632
               

               
Cow position:
               
chr18:44254081-44253473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
30-470
               

               
Cow position:
               
chr18:49022875-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
30-562
               

               
Cow position:
               
chr18:50245970-50246505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
31-558
               

               
Cow position:
               
chr18:42791698-42792228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
31-596
               

               
Cow position:
               
chr18:55017774-55018343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
32-490
               

               
Cow position:
               
chr18:50099878-50100334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
32-508
               

               
Cow position:
               
chr18:33064623-33064148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 323
               

               
Conread position:
               
32-594
               

               
Cow position:
               
chr18:42791363-42791928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 171
               

               
Conread position:
               
33-515
               

               
Cow position:
               
chr18:40074919-40075401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 103
               

               
Conread position:
               
34-430
               

               
Cow position:
               
chr18:51367614-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
34-502
               

               
Cow position:
               
chr18:51812483-51812015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 232
               

               
Conread position:
               
34-507
               

               
Cow position:
               
chr18:55523457-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
34-562
               

               
Cow position:
               
chr18:50083347-50083878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
35-343
               

               
Cow position:
               
chr18:52011873-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-354
               

               
Cow position:
               
chr18:40085954-40085634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
148, 153
               

               
Conread position:
               
35-387
               

               
Cow position:
               
chr18:40306991-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
169, 163
               

               
Conread position:
               
35-387
               

               
Cow position:
               
chr18:49022964-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 147
               

               
Conread position:
               
35-394
               

               
Cow position:
               
chr18:56329197-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-407
               

               
Cow position:
               
chr18:50849157-50849528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
340, 0
               

               
Conread position:
               
35-416
               

               
Cow position:
               
chr18:14453222-14452841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
35-417
               

               
Cow position:
               
chr18:42693310-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 77
               

               
Conread position:
               
35-423
               

               
Cow position:
               
chr18:50251149-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
35-463
               

               
Cow position:
               
chr18:42744231-42743803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
35-463
               

               
Cow position:
               
chr18:49032476-49032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-477
               

               
Cow position:
               
chr18:50246395-50246837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr18:55497640-55497189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr18:56316283-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 177
               

               
Conread position:
               
35-489
               

               
Cow position:
               
chr18:53571877-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 22
               

               
Conread position:
               
35-491
               

               
Cow position:
               
chr18:56247498-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr18:56128187-56128644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-493
               

               
Cow position:
               
chr18:14453786-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
243, 235
               

               
Conread position:
               
35-494
               

               
Cow position:
               
chr18:44253334-44252883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
35-502
               

               
Cow position:
               
chr18:50250984-50251446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
35-507
               

               
Cow position:
               
chr18:49033232-49032760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
35-507
               

               
Cow position:
               
chr18:50848653-50849125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 126
               

               
Conread position:
               
35-508
               

               
Cow position:
               
chr18:50083768-50084241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
35-508
               

               
Cow position:
               
chr18:50245723-50246196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
35-508
               

               
Cow position:
               
chr18:52012209-52011737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
35-509
               

               
Cow position:
               
chr18:50099797-50100270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:33064116-33063639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:33064284-33063807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 246
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:42827470-42827952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 0
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:49022796-49023273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 126
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:52012125-52011648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:56248175-56247690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
324, 12
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:56329785-56329308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 148
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:56329869-56329392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:56329953-56329476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
35-512
               

               
Cow position:
               
chr18:56330121-56329644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr18:22634540-22635018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr18:42985326-42984846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr18:44154217-44153744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 0
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr18:53586429-53585950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
35-515
               

               
Cow position:
               
chr18:53586933-53586453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
35-535
               

               
Cow position:
               
chr18:33064200-33063702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 239
               

               
Conread position:
               
35-560
               

               
Cow position:
               
chr18:50848401-50848929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
35-561
               

               
Cow position:
               
chr18:55523626-55524155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
35-562
               

               
Cow position:
               
chr18:33064872-33064342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 161
               

               
Conread position:
               
35-562
               

               
Cow position:
               
chr18:42791450-42791980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
35-562
               

               
Cow position:
               
chr18:50099209-50099739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
35-569
               

               
Cow position:
               
chr18:56329617-56329081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 522
               

               
Conread position:
               
35-573
               

               
Cow position:
               
chr18:42791534-42792074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
474, 527
               

               
Conread position:
               
35-573
               

               
Cow position:
               
chr18:50848485-50849025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
35-573
               

               
Cow position:
               
chr18:51367948-51367409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
35-588
               

               
Cow position:
               
chr18:50281656-50282212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
35-589
               

               
Cow position:
               
chr18:50099125-50099681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:40075005-40075567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:42791870-42792432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:50059137-50058575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 527
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:50099545-50100107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 50
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:50271443-50272005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:53560160-53560722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
35-594
               

               
Cow position:
               
chr18:55067044-55066482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
35-596
               

               
Cow position:
               
chr18:42837954-42837389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 233
               

               
Conread position:
               
35-596
               

               
Cow position:
               
chr18:56493910-56494475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
35-636
               

               
Cow position:
               
chr18:42675255-42674647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 316
               

               
Conread position:
               
36-505
               

               
Cow position:
               
chr18:42694065-42693596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
36-636
               

               
Cow position:
               
chr18:51789907-51789303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
37-569
               

               
Cow position:
               
chr18:49033398-49032864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 525
               

               
Conread position:
               
38-508
               

               
Cow position:
               
chr18:22634625-22635095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
38-508
               

               
Cow position:
               
chr18:42960314-42959844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 235
               

               
Conread position:
               
38-594
               

               
Cow position:
               
chr18:56493656-56494220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
38-636
               

               
Cow position:
               
chr18:42675336-42674731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
39-508
               

               
Cow position:
               
chr18:52012037-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
39-515
               

               
Cow position:
               
chr18:56128359-56128835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-527
               

               
Cow position:
               
chr18:40306827-40307313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
218, 229
               

               
Conread position:
               
39-573
               

               
Cow position:
               
chr18:40086194-40085665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
39-594
               

               
Cow position:
               
chr18:54993058-54993616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
39-636
               

               
Cow position:
               
chr18:44398453-44397849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 159
               

               
Conread position:
               
40-442
               

               
Cow position:
               
chr18:43048741-43048339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr18:52012288-52011812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 156
               

               
Conread position:
               
40-597
               

               
Cow position:
               
chr18:53560081-53560642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 522
               

               
Conread position:
               
40-636
               

               
Cow position:
               
chr18:52446927-52447530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
477, 522
               

               
Conread position:
               
41-460
               

               
Cow position:
               
chr18:54967275-54967694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
41-508
               

               
Cow position:
               
chr18:42960473-42960012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
152, 116
               

               
Conread position:
               
41-508
               

               
Cow position:
               
chr18:51766093-51765627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
41-594
               

               
Cow position:
               
chr18:54979800-54980356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
43-596
               

               
Cow position:
               
chr18:44184728-44184171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
43-636
               

               
Cow position:
               
chr18:43094004-43093416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
44-508
               

               
Cow position:
               
chr18:40306664-40307127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
460, 0
               

               
Conread position:
               
44-515
               

               
Cow position:
               
chr18:40306496-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 154
               

               
Conread position:
               
45-500
               

               
Cow position:
               
chr18:14453296-14452841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
45-508
               

               
Cow position:
               
chr18:50049147-50048684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
46-481
               

               
Cow position:
               
chr18:49021728-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
46-505
               

               
Cow position:
               
chr18:54980057-54980516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
46-515
               

               
Cow position:
               
chr18:40306330-40306799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
211, 222
               

               
Conread position:
               
46-515
               

               
Cow position:
               
chr18:54967697-54968164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
46-597
               

               
Cow position:
               
chr18:54979469-54980024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
46-603
               

               
Cow position:
               
chr18:54992729-54993289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
46-632
               

               
Cow position:
               
chr18:54993401-54993991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
47-470
               

               
Cow position:
               
chr18:51765332-51764909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
47-492
               

               
Cow position:
               
chr18:53635966-53635521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-508
               

               
Cow position:
               
chr18:51765416-51764955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
47-508
               

               
Cow position:
               
chr18:53635546-53635086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 0
               

               
Conread position:
               
47-508
               

               
Cow position:
               
chr18:56128619-56129079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 220
               

               
Conread position:
               
47-512
               

               
Cow position:
               
chr18:53635714-53635249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 153
               

               
Conread position:
               
47-512
               

               
Cow position:
               
chr18:56128451-56128916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
157, 152
               

               
Conread position:
               
47-517
               

               
Cow position:
               
chr18:53610221-53609752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
467, 0
               

               
Conread position:
               
47-522
               

               
Cow position:
               
chr18:53635798-53635324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 0
               

               
Conread position:
               
49-512
               

               
Cow position:
               
chr18:53610387-53609924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-515
               

               
Cow position:
               
chr18:53525686-53526154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
49-592
               

               
Cow position:
               
chr18:54979302-54979850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
49-594
               

               
Cow position:
               
chr18:54992562-54993112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
49-636
               

               
Cow position:
               
chr18:53509232-53509828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
52-507
               

               
Cow position:
               
chr18:51400279-51400734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
53-494
               

               
Cow position:
               
chr18:51838786-51838350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
53-508
               

               
Cow position:
               
chr18:33065022-33064567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
55-569
               

               
Cow position:
               
chr18:50848169-50848685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
56-570
               

               
Cow position:
               
chr18:42827407-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 130
               

               
Conread position:
               
57-599
               

               
Cow position:
               
chr18:43175352-43174806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
58-507
               

               
Cow position:
               
chr18:53636125-53635674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
58-507
               

               
Cow position:
               
chr18:56128040-56128491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
58-561
               

               
Cow position:
               
chr18:33093101-33092595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
61-597
               

               
Cow position:
               
chr18:42694208-42693668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
65-635
               

               
Cow position:
               
chr18:41197503-41198080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 487
               

               
Conread position:
               
71-506
               

               
Cow position:
               
chr18:14454002-14453567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
71-515
               

               
Cow position:
               
chr18:44253873-44253429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
71-594
               

               
Cow position:
               
chr18:43175590-43175064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
73-573
               

               
Cow position:
               
chr18:43094219-43093724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
444, 23
               

               
Conread position:
               
73-636
               

               
Cow position:
               
chr18:1417854-1418424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
440, 497
               

               
Conread position:
               
80-636
               

               
Cow position:
               
chr18:43093724-43093164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
80-636
               

               
Cow position:
               
chr18:51813106-51812546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
81-512
               

               
Cow position:
               
chr18:50295216-50295647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 125
               

               
Conread position:
               
85-319
               

               
Cow position:
               
chr18:43053427-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 115
               

               
Conread position:
               
90-562
               

               
Cow position:
               
chr18:50059670-50059195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 95
               

               
Conread position:
               
94-515
               

               
Cow position:
               
chr18:53498010-53498437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
264, 269
               

               
Conread position:
               
109-562
               

               
Cow position:
               
chr18:51969313-51969767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
169, 160
               

               
Conread position:
               
115-485
               

               
Cow position:
               
chr18:42724778-42724408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr18:56248177-56247808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
118-419
               

               
Cow position:
               
chr18:44153967-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
118-508
               

               
Cow position:
               
chr18:54967016-54967405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 89
               

               
Conread position:
               
118-515
               

               
Cow position:
               
chr18:42960480-42960089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
118-515
               

               
Cow position:
               
chr18:43023090-43022693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
118-562
               

               
Cow position:
               
chr18:50049246-50048795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 235
               

               
Conread position:
               
118-596
               

               
Cow position:
               
chr18:44253335-44252861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
118-635
               

               
Cow position:
               
chr18:42675340-42674816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
119-494
               

               
Cow position:
               
chr18:52012459-52012086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
119-515
               

               
Cow position:
               
chr18:56434111-56434507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 144
               

               
Conread position:
               
119-561
               

               
Cow position:
               
chr18:43167606-43168051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
234, 228
               

               
Conread position:
               
120-630
               

               
Cow position:
               
chr18:42985577-42985060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 227
               

               
Conread position:
               
121-636
               

               
Cow position:
               
chr18:44398455-44397933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
123-635
               

               
Cow position:
               
chr18:40074925-40075444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
338, 311
               

               
Conread position:
               
124-516
               

               
Cow position:
               
chr18:43048741-43048349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 332
               

               
Conread position:
               
125-636
               

               
Cow position:
               
chr18:51766093-51765576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
127-595
               

               
Cow position:
               
chr18:50098965-50099437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr18:42724594-42724316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 48
               

               
Conread position:
               
131-516
               

               
Cow position:
               
chr18:53525686-53526071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
131-594
               

               
Cow position:
               
chr18:54967113-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
133-447
               

               
Cow position:
               
chr18:51873695-51874010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr18:56128036-56128405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
136-512
               

               
Cow position:
               
chr18:53636129-53635753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
137-566
               

               
Cow position:
               
chr18:14453288-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
137-589
               

               
Cow position:
               
chr18:56316049-56316503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 413
               

               
Conread position:
               
137-594
               

               
Cow position:
               
chr18:33065022-33064562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
137-636
               

               
Cow position:
               
chr18:51838786-51838285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
280, 195
               

               
Conread position:
               
138-525
               

               
Cow position:
               
chr18:53610382-53609996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
140-559
               

               
Cow position:
               
chr18:56330184-56329760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 128
               

               
Conread position:
               
141-631
               

               
Cow position:
               
chr18:14454016-14453519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
141-635
               

               
Cow position:
               
chr18:43120403-43119902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 212
               

               
Conread position:
               
142-485
               

               
Cow position:
               
chr18:49022233-49022576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
142-561
               

               
Cow position:
               
chr18:50031061-50030640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
148-636
               

               
Cow position:
               
chr18:51839550-51839055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
150-574
               

               
Cow position:
               
chr18:56248225-56247810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
386, 48
               

               
Conread position:
               
160-594
               

               
Cow position:
               
chr18:53559697-53560134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
164-570
               

               
Cow position:
               
chr18:50250946-50251352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
164-594
               

               
Cow position:
               
chr18:50083309-50083742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
164-596
               

               
Cow position:
               
chr18:55523335-55523771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr18:40086982-40086645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 5
               

               
Conread position:
               
189-635
               

               
Cow position:
               
chr18:42837968-42837515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
332, 0
               

               
Conread position:
               
189-636
               

               
Cow position:
               
chr18:14453321-14452866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr18:50251759-50252076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
193-592
               

               
Cow position:
               
chr18:54966923-54967325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 7
               

               
Conread position:
               
194-508
               

               
Cow position:
               
chr18:56267485-56267174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
194-512
               

               
Cow position:
               
chr18:50031093-50030777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
294, 154
               

               
Conread position:
               
194-512
               

               
Cow position:
               
chr18:56330215-56329896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
8, 159
               

               
Conread position:
               
200-512
               

               
Cow position:
               
chr18:43023092-43022780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
201-406
               

               
Cow position:
               
chr18:43053395-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-594
               

               
Cow position:
               
chr18:54967015-54967411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
201-636
               

               
Cow position:
               
chr18:14454040-14453598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 68
               

               
Conread position:
               
202-636
               

               
Cow position:
               
chr18:1417815-1418256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
310, 354
               

               
Conread position:
               
203-512
               

               
Cow position:
               
chr18:52012459-52012152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
203-515
               

               
Cow position:
               
chr18:50059725-50059413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-589
               

               
Cow position:
               
chr18:50098957-50099345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
204-515
               

               
Cow position:
               
chr18:44239740-44240051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
206-507
               

               
Cow position:
               
chr18:43175698-43175406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
236, 98
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr18:50083271-50083626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
213-588
               

               
Cow position:
               
chr18:55523300-55523678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
303, 324
               

               
Conread position:
               
214-486
               

               
Cow position:
               
chr18:53610474-53610202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
214-515
               

               
Cow position:
               
chr18:53509231-53509532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 138
               

               
Conread position:
               
214-515
               

               
Cow position:
               
chr18:53525685-53525986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 149
               

               
Conread position:
               
215-636
               

               
Cow position:
               
chr18:51969018-51969427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
217-493
               

               
Cow position:
               
chr18:51873695-51873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
219-529
               

               
Cow position:
               
chr18:40306167-40306476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
285, 0
               

               
Conread position:
               
220-515
               

               
Cow position:
               
chr18:56128036-56128331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 47
               

               
Conread position:
               
224-490
               

               
Cow position:
               
chr18:43053456-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
224-573
               

               
Cow position:
               
chr18:40324881-40324530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
234-508
               

               
Cow position:
               
chr18:50295201-50295475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
155, 140
               

               
Conread position:
               
236-597
               

               
Cow position:
               
chr18:56493772-56494140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
237-635
               

               
Cow position:
               
chr18:43175592-43175187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
258-635
               

               
Cow position:
               
chr18:42837983-42837599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
260, 304
               

               
Conread position:
               
269-509
               

               
Cow position:
               
chr18:50098939-50099178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
269-562
               

               
Cow position:
               
chr18:50271425-50271721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
269-562
               

               
Cow position:
               
chr18:50281638-50281934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
282-515
               

               
Cow position:
               
chr18:42985583-42985350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-566
               

               
Cow position:
               
chr18:51873689-51873964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
155, 12
               

               
Conread position:
               
293-569
               

               
Cow position:
               
chr18:33093118-33092840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
225, 246
               

               
Conread position:
               
293-631
               

               
Cow position:
               
chr18:40086948-40086606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
314-512
               

               
Cow position:
               
chr18:41197501-41197697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
318-636
               

               
Cow position:
               
chr18:50295201-50295526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
325-562
               

               
Cow position:
               
chr18:43053439-43053199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
192, 227
               
Show alignments to all cow chromosomes.