Cow genome map
| Conread name: | Ss1.1-rgul0101_i8.5 |
| Conread position: | 3-493 |
| Cow position: | chr21:12658864-12659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-486 |
| Cow position: | chr21:12659294-12659767 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 345, 12 |
| Conread position: | 19-423 |
| Cow position: | chr21:12608798-12608394 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 20-314 |
| Cow position: | chr21:34222835-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 51 |
| Conread position: | 20-501 |
| Cow position: | chr21:12608461-12607980 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 135, 131 |
| Conread position: | 20-530 |
| Cow position: | chr21:12608881-12608373 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 315 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 494, 0 |
| Conread position: | 24-486 |
| Cow position: | chr21:12659473-12659935 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 24-512 |
| Cow position: | chr21:12659053-12659541 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 151, 170 |
| Conread position: | 25-482 |
| Cow position: | chr21:34222998-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 35-429 |
| Cow position: | chr21:12608362-12607968 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 169, 158 |
| Conread position: | 35-486 |
| Cow position: | chr21:12658980-12659431 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-486 |
| Cow position: | chr21:12659400-12659851 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 223, 234 |
| Conread position: | 35-492 |
| Cow position: | chr21:12608698-12608241 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-492 |
| Cow position: | chr21:12659148-12659605 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 35-507 |
| Cow position: | chr21:12659232-12659704 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-492 |
| Cow position: | chr21:12658814-12659269 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 60-493 |
| Cow position: | chr21:12608923-12608492 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 116-531 |
| Cow position: | chr21:34223075-34222662 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 174 |
| Conread position: | 124-528 |
| Cow position: | chr21:34222983-34222581 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 203-561 |
| Cow position: | chr21:34223153-34222795 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 41 |
Show alignments to all cow chromosomes.