Cow genome map
| Conread name: | Ss1.1-rgul0101_i8.5 |
| Conread position: | 1-387 |
| Cow position: | chr24:17077897-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 1-567 |
| Cow position: | chr24:17070487-17071057 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 3-484 |
| Cow position: | chr24:17035507-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 69 |
| Conread position: | 3-573 |
| Cow position: | chr24:17035675-17035103 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 149 |
| Conread position: | 3-635 |
| Cow position: | chr24:17035843-17035204 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 92 |
| Conread position: | 3-636 |
| Cow position: | chr24:17036596-17035959 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 49 |
| Conread position: | 17-596 |
| Cow position: | chr24:17070420-17071003 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 17-636 |
| Cow position: | chr24:17035997-17035371 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 251 |
| Conread position: | 18-562 |
| Cow position: | chr24:17078299-17077752 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 19-470 |
| Cow position: | chr24:17077962-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-493 |
| Cow position: | chr24:17035407-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 250 |
| Conread position: | 19-562 |
| Cow position: | chr24:17035575-17035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 0 |
| Conread position: | 20-488 |
| Cow position: | chr24:17070591-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 247 |
| Conread position: | 20-512 |
| Cow position: | chr24:17078129-17077637 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 184 |
| Conread position: | 20-552 |
| Cow position: | chr24:17078045-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 328 |
| Conread position: | 20-562 |
| Cow position: | chr24:17036078-17035533 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 247 |
| Conread position: | 20-562 |
| Cow position: | chr24:17036414-17035869 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 167 |
| Conread position: | 20-594 |
| Cow position: | chr24:17036498-17035921 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 52 |
| Conread position: | 20-636 |
| Cow position: | chr24:17036246-17035623 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 542 |
| Conread position: | 26-635 |
| Cow position: | chr24:17036324-17035708 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 38-594 |
| Cow position: | chr24:17078363-17077804 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 76 |
| Conread position: | 39-412 |
| Cow position: | chr24:17013147-17013519 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 132-636 |
| Cow position: | chr24:17078351-17077842 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 290 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 138-573 |
| Cow position: | chr24:17036548-17036111 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 155-359 |
| Cow position: | chr24:16986445-16986649 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 44 |
| Conread position: | 155-525 |
| Cow position: | chr24:17013179-17013548 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 204-635 |
| Cow position: | chr24:17078365-17077927 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 309, 358 |
| Conread position: | 207-515 |
| Cow position: | chr24:17013147-17013455 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 141 |
| Conread position: | 239-450 |
| Cow position: | chr24:16986445-16986656 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 18, 24 |
Show alignments to all cow chromosomes.