Cow genome map

Conread name: Ss1.1-rgul0101_i8.5

Conread position: 1-228
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 24

Conread position: 1-384
Cow position:
Alignm length: 386
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 199

Conread position: 1-432
Cow position:
Alignm length: 434
Alignm identity: 273
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 199

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 1-494
Cow position:
Alignm length: 502
Alignm identity: 300
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 119

Conread position: 1-494
Cow position:
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 1-509
Cow position:
Alignm length: 511
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-512
Cow position:
Alignm length: 520
Alignm identity: 322
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 139, 134

Conread position: 1-561
Cow position:
Alignm length: 568
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 1-567
Cow position:
Alignm length: 577
Alignm identity: 340
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 95

Conread position: 1-584
Cow position:
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 1-594
Cow position:
Alignm length: 605
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 1-636
Cow position:
Alignm length: 645
Alignm identity: 395
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 120, 109

Conread position: 1-636
Cow position:
Alignm length: 648
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 185

Conread position: 2-384
Cow position:
Alignm length: 384
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 24

Conread position: 3-423
Cow position:
Alignm length: 423
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 111

Conread position: 3-479
Cow position:
Alignm length: 479
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 5

Conread position: 3-485
Cow position:
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 3-507
Cow position:
Alignm length: 508
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 94

Conread position: 3-507
Cow position:
Alignm length: 506
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 3-507
Cow position:
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-528
Cow position:
Alignm length: 532
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 3-636
Cow position:
Alignm length: 646
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 3-636
Cow position:
Alignm length: 645
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 428, 435

Conread position: 6-636
Cow position:
Alignm length: 641
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 164

Conread position: 7-558
Cow position:
Alignm length: 555
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 152

Conread position: 7-596
Cow position:
Alignm length: 597
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 262

Conread position: 7-636
Cow position:
Alignm length: 645
Alignm identity: 388
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 284, 326

Conread position: 9-507
Cow position:
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 185

Conread position: 16-594
Cow position:
Alignm length: 583
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 501, 544

Conread position: 17-512
Cow position:
Alignm length: 506
Alignm identity: 315
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 54

Conread position: 17-528
Cow position:
Alignm length: 514
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 175

Conread position: 17-529
Cow position:
Alignm length: 513
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 0

Conread position: 17-591
Cow position:
Alignm length: 583
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 17-596
Cow position:
Alignm length: 589
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 98

Conread position: 19-346
Cow position:
Alignm length: 331
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 95, 90

Conread position: 19-359
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 53

Conread position: 19-486
Cow position:
Alignm length: 471
Alignm identity: 292
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 84

Conread position: 19-597
Cow position:
Alignm length: 584
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 498, 543

Conread position: 20-295
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 65

Conread position: 20-386
Cow position:
Alignm length: 369
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 72

Conread position: 20-484
Cow position:
Alignm length: 467
Alignm identity: 292
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 87, 72

Conread position: 20-527
Cow position:
Alignm length: 510
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 88

Conread position: 20-530
Cow position:
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 99

Conread position: 20-558
Cow position:
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 487, 519

Conread position: 20-561
Cow position:
Alignm length: 545
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 494, 0

Conread position: 20-585
Cow position:
Alignm length: 571
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 381

Conread position: 20-594
Cow position:
Alignm length: 586
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 101

Conread position: 20-636
Cow position:
Alignm length: 625
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 542

Conread position: 24-314
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 72

Conread position: 24-377
Cow position:
Alignm length: 357
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 71

Conread position: 24-508
Cow position:
Alignm length: 491
Alignm identity: 288
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 71

Conread position: 25-463
Cow position:
Alignm length: 443
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 71

Conread position: 25-494
Cow position:
Alignm length: 471
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 155

Conread position: 25-561
Cow position:
Alignm length: 541
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 493, 514

Conread position: 26-494
Cow position:
Alignm length: 471
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 174

Conread position: 32-488
Cow position:
Alignm length: 461
Alignm identity: 283
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 105

Conread position: 35-480
Cow position:
Alignm length: 448
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 318, 332

Conread position: 35-485
Cow position:
Alignm length: 452
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 253, 247

Conread position: 35-492
Cow position:
Alignm length: 458
Alignm identity: 267
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 35-512
Cow position:
Alignm length: 479
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 79

Conread position: 35-515
Cow position:
Alignm length: 482
Alignm identity: 285
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 79, 73

Conread position: 35-594
Cow position:
Alignm length: 564
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 482, 535

Conread position: 35-597
Cow position:
Alignm length: 576
Alignm identity: 355
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 66

Conread position: 35-636
Cow position:
Alignm length: 611
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 234

Conread position: 40-512
Cow position:
Alignm length: 474
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 204

Conread position: 49-481
Cow position:
Alignm length: 436
Alignm identity: 264
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 51

Conread position: 51-398
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 128

Conread position: 56-384
Cow position:
Alignm length: 332
Alignm identity: 211
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 148, 143

Conread position: 56-636
Cow position:
Alignm length: 591
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 144

Conread position: 57-461
Cow position:
Alignm length: 410
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 144

Conread position: 57-506
Cow position:
Alignm length: 452
Alignm identity: 269
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 293

Conread position: 69-512
Cow position:
Alignm length: 449
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 114

Conread position: 79-509
Cow position:
Alignm length: 434
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 64

Conread position: 85-595
Cow position:
Alignm length: 517
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 262

Conread position: 104-636
Cow position:
Alignm length: 542
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 76

Conread position: 118-517
Cow position:
Alignm length: 402
Alignm identity: 243
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 151

Conread position: 118-528
Cow position:
Alignm length: 413
Alignm identity: 256
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 76

Conread position: 119-464
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 150

Conread position: 119-486
Cow position:
Alignm length: 370
Alignm identity: 232
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 139, 150

Conread position: 119-512
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 119-512
Cow position:
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 10

Conread position: 119-512
Cow position:
Alignm length: 397
Alignm identity: 248
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 79

Conread position: 119-594
Cow position:
Alignm length: 481
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 84

Conread position: 123-594
Cow position:
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 14

Conread position: 124-512
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 40

Conread position: 133-482
Cow position:
Alignm length: 354
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 10

Conread position: 138-594
Cow position:
Alignm length: 463
Alignm identity: 293
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 7, 192

Conread position: 139-425
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 219, 25

Conread position: 140-344
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 46

Conread position: 140-490
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 42

Conread position: 140-552
Cow position:
Alignm length: 418
Alignm identity: 252
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 48

Conread position: 141-393
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 128

Conread position: 141-512
Cow position:
Alignm length: 373
Alignm identity: 250
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 58

Conread position: 147-486
Cow position:
Alignm length: 343
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 40

Conread position: 155-561
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 348

Conread position: 160-509
Cow position:
Alignm length: 357
Alignm identity: 223
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 94

Conread position: 162-486
Cow position:
Alignm length: 327
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 36

Conread position: 188-558
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 250

Conread position: 202-493
Cow position:
Alignm length: 293
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 265, 104

Conread position: 202-513
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 85

Conread position: 207-409
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 214-632
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 348

Conread position: 215-594
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 55

Conread position: 217-531
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 49

Conread position: 219-509
Cow position:
Alignm length: 292
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 138, 128

Conread position: 223-584
Cow position:
Alignm length: 366
Alignm identity: 231
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 51

Conread position: 224-509
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 280, 0

Conread position: 230-512
Cow position:
Alignm length: 284
Alignm identity: 188
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 134, 125

Conread position: 286-567
Cow position:
Alignm length: 286
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 156, 104

Conread position: 287-630
Cow position:
Alignm length: 353
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 224, 251

Conread position: 291-493
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.