Cow genome map

Conread name: Ss1.1-rgul0101_i8.5

Conread position: 1-263
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 185, 194

Conread position: 1-472
Cow position:
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 113

Conread position: 1-482
Cow position:
Alignm length: 484
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 63

Conread position: 1-531
Cow position:
Alignm length: 535
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1-560
Cow position:
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 189

Conread position: 1-562
Cow position:
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-567
Cow position:
Alignm length: 572
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-594
Cow position:
Alignm length: 599
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 560

Conread position: 1-636
Cow position:
Alignm length: 646
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 71

Conread position: 2-327
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 107

Conread position: 3-408
Cow position:
Alignm length: 410
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 184

Conread position: 3-429
Cow position:
Alignm length: 432
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 3-494
Cow position:
Alignm length: 493
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 61

Conread position: 3-558
Cow position:
Alignm length: 559
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 513, 179

Conread position: 3-573
Cow position:
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 19

Conread position: 3-594
Cow position:
Alignm length: 599
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 63

Conread position: 3-597
Cow position:
Alignm length: 599
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 510, 109

Conread position: 3-635
Cow position:
Alignm length: 643
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 188

Conread position: 7-497
Cow position:
Alignm length: 494
Alignm identity: 304
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 8, 26

Conread position: 7-507
Cow position:
Alignm length: 505
Alignm identity: 317
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 92, 88

Conread position: 8-381
Cow position:
Alignm length: 375
Alignm identity: 236
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 13

Conread position: 9-573
Cow position:
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 152

Conread position: 14-571
Cow position:
Alignm length: 569
Alignm identity: 347
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 61

Conread position: 14-594
Cow position:
Alignm length: 587
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 7

Conread position: 15-594
Cow position:
Alignm length: 585
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 17-432
Cow position:
Alignm length: 424
Alignm identity: 261
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 29

Conread position: 17-594
Cow position:
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 84

Conread position: 17-635
Cow position:
Alignm length: 628
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 54

Conread position: 18-561
Cow position:
Alignm length: 552
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 20-316
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-492
Cow position:
Alignm length: 474
Alignm identity: 300
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 238, 246

Conread position: 26-429
Cow position:
Alignm length: 410
Alignm identity: 254
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 45

Conread position: 32-507
Cow position:
Alignm length: 481
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 8

Conread position: 35-431
Cow position:
Alignm length: 398
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 169

Conread position: 35-464
Cow position:
Alignm length: 433
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 81

Conread position: 35-481
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 78

Conread position: 35-509
Cow position:
Alignm length: 476
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 75

Conread position: 35-636
Cow position:
Alignm length: 612
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 477, 18

Conread position: 39-594
Cow position:
Alignm length: 568
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 53-398
Cow position:
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 136

Conread position: 56-449
Cow position:
Alignm length: 397
Alignm identity: 256
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 51, 63

Conread position: 57-508
Cow position:
Alignm length: 457
Alignm identity: 286
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 63

Conread position: 80-507
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 34

Conread position: 80-594
Cow position:
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 106

Conread position: 102-567
Cow position:
Alignm length: 471
Alignm identity: 285
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 70, 77

Conread position: 140-501
Cow position:
Alignm length: 363
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 332, 0

Conread position: 141-555
Cow position:
Alignm length: 424
Alignm identity: 271
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 55

Conread position: 159-635
Cow position:
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 250

Conread position: 165-635
Cow position:
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 29

Conread position: 184-573
Cow position:
Alignm length: 396
Alignm identity: 258
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 247, 21

Conread position: 184-594
Cow position:
Alignm length: 421
Alignm identity: 266
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 52

Conread position: 203-493
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 61

Conread position: 225-523
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 136

Conread position: 226-636
Cow position:
Alignm length: 418
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 283-573
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 148, 36

Conread position: 283-573
Cow position:
Alignm length: 294
Alignm identity: 184
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 236, 277

Show alignments to all cow chromosomes.