Cow genome map
| Conread name: | Ss1.1-rgul0101_i8.5 |
| Conread position: | 1-495 |
| Cow position: | chr3:62722213-62721718 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 1-636 |
| Cow position: | chr3:62742805-62743427 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 3-566 |
| Cow position: | chr3:62722127-62721559 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 3-636 |
| Cow position: | chr3:68027037-68027679 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 561 |
| Conread position: | 14-569 |
| Cow position: | chr3:77351197-77350652 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 351 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 14-596 |
| Cow position: | chr3:62742904-62743468 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 370 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 502, 103 |
| Conread position: | 16-600 |
| Cow position: | chr3:68045729-68046317 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 92 |
| Conread position: | 17-515 |
| Cow position: | chr3:68045562-68046060 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 313 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 17-636 |
| Cow position: | chr3:62722364-62721738 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 17-636 |
| Cow position: | chr3:68026969-68027595 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 382 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 20-512 |
| Cow position: | chr3:68027224-68027716 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 20-560 |
| Cow position: | chr3:68045817-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 90 |
| Conread position: | 20-561 |
| Cow position: | chr3:62722277-62721733 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 20-636 |
| Cow position: | chr3:62742410-62743024 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 178 |
| Conread position: | 22-262 |
| Cow position: | chr3:68027478-68027718 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 178, 170 |
| Conread position: | 24-636 |
| Cow position: | chr3:68045653-68046272 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 77 |
| Conread position: | 34-493 |
| Cow position: | chr3:77351012-77350564 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 35-474 |
| Cow position: | chr3:68027323-68027762 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 236, 244 |
| Conread position: | 128-501 |
| Cow position: | chr3:62742264-62742639 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 6, 83 |
| Conread position: | 202-596 |
| Cow position: | chr3:62742257-62742652 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 326, 97 |
Show alignments to all cow chromosomes.